Juglans regia (English walnut): 108982561
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Entry
108982561 CDS
T05245
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
jre
Juglans regia (English walnut)
Pathway
jre03013
Nucleocytoplasmic transport
jre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108982561
03015 mRNA surveillance pathway
108982561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
108982561
03041 Spliceosome [BR:
jre03041
]
108982561
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108982561
Spliceosome [BR:
jre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
108982561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
LsmAD
Motif
Other DBs
NCBI-GeneID:
108982561
NCBI-ProteinID:
XP_018809517
UniProt:
A0A833U5F9
A0A2I4DQU1
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All DBs
Position
14:complement(8389950..8396043)
Genome browser
AA seq
869 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLLKSQKFSPELEHLVDMTKVKMDVIKPWIANRVTELL
GFEDEVLINFIYGLLEKKEVNGKEVQISLTGFMEKNTVKFMKELWTLLLSAQKNVSGVPQ
QFLDAKEEENKKKKAEADRIANEIEKNKAKESRELEQERLKKMDDIAETSGINPALEPNK
PRALSNLSKDEEEADRRNNGVRGRHRVSESPHPAKRSPSSPRGSPSRSISRSFSNAKSHS
DDRHKSRSSSRSPKARGRSISVGRVYRSPLRSMTPHRRHSPLHSRSPSRRRSSYSRRRSR
SRSHRRSPSPVRRRLRSPFRRRSPSPFRRRRSPSPVRRRRSPSPIRRRRSPSPVRRRRSP
SPIRRRRSPSPVRRRRSPSPIRRRSPSPIRRRSPSPIRHRSPSPFRRGSLVQPQYRRSPP
RRISPLVRRRSPIPSRRRSSTPSLRRSPSPYRSSSSSPIQRTSPSPIRRKSPTQHRSPMR
SPRERIRTHEKLPPLARRSSSLRSPQRDPRVRGDICNKVSVSKSSPERSLSVSESPPLAR
NRVHSEDRKSFSPRQSPVRQTGKQVSRDGISSAQNPHYDSLETSEEREEPNFVREDVDHT
SKSSQKRSMHSSAVDKQKDSPIKVRYKDGLAPKGLADHQVTESQAAPDTMELRRKGEEIR
SDKSSGRVVPPESSTLYKDSSVGDGKRPSYPGQSTDVKNRSRPNNVNSNQRDADDVQYLI
GKVDHNNQTAPYDSSSERSDKHKSEYKKRRKHKRSERKEVDSDDDDSYDSELEDRKEAKR
RRRKDEKKLRKEEKRKRREERRRRREERRAGKLKVKSQDDDYGSEVEHTARMESNPSDDE
EMQSEQKRLEIELRKKALESLKAKKGISH
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggcttcttccggggtacttcggccgatcaagacactcggttttcgaacaaa
caagcgaagctgttgaaatcgcagaagttctctcctgaattagagcatctggtggacatg
acgaaggtgaagatggatgttatcaaaccgtggattgctaatcgggtgacagaacttctc
gggttcgaagatgaagttcttattaactttatttatggtcttctggagaaaaaggaagtg
aatggaaaggaggttcaaatatcactcacaggattcatggagaagaatactgtgaagttt
atgaaagagctttggacgctcctccttagtgcgcagaagaatgtaagcggtgttcctcag
cagtttttggatgccaaagaagaagaaaataagaagaagaaggctgaggcagataggata
gcaaatgagattgagaagaataaagctaaggaaagtagagaacttgagcaagagagattg
aagaaaatggacgacatagctgaaacgagtggaattaaccctgctttggagccaaacaag
cccagggctttgagtaacctttctaaggatgaggaagaagctgacaggaggaataatggc
gtgagaggaaggcacagggtttccgaatcaccacatccagccaaacgttccccttcatcc
cctcgaggctctccatctcgatcaattagcagatccttttctaatgccaaaagccattcg
gatgacagacacaagtcaaggagttcatctagatcacctaaagctcgagggcgatctatt
tctgtgggcagggtgtaccgttccccactcagatctatgacacctcatcgaaggcattca
cctttgcattcccgctctccttcaagacggagatcatcttattcaaggcgaagatctaga
tcacgctcacatcgtagatcaccctctccagtgaggcgtcggttgcgctctccttttcgc
cgcaggtcaccttctccatttcgacgccgtaggtctccttctccagttcgacgccgtagg
tctccttctcctattaggcgtcgaagatcaccttctcctgttaggcgtcgaagatcacct
tctcctattaggcgtcgaagatcaccttcacctgtgcgacgacggaggtcgccatcacct
attcgacgtaggtcaccctcacctattcgacgtagatcaccctcacctattcgacacaga
tcaccatctccctttcgaagaggttctcttgtacaaccacaatatcgaaggtctcctccc
cgacgcatctctccacttgtgcggcgtaggtcacctatacctagccgtaggagatcatcg
accccgtccttgcgtaggtctccttcaccctacagatcaagttcttcatctcctatacag
cgtacatctccatcaccaatcaggagaaaatctccaacgcaacataggagcccaatgcga
tcccccagagagagaatcaggacacatgaaaaactgccgcccctggcaaggcgatctagt
tctttgaggtctccgcagagggatccgagagttcgaggcgatatctgcaataaagtgtca
gtttcaaagtcttcaccagagaggtctttatctgtttcagaatccccaccactggctaga
aacagggttcatagtgaagataggaagtcatttagtccacgtcagagtcctgttaggcaa
acagggaagcaagtgagccgtgatggcatcagttctgcacaaaatcctcattatgacagt
ctagaaacaagcgaagaaagggaagaacctaactttgtgagggaggatgtggatcataca
tcaaagtcgtcacagaaaaggtccatgcattcatctgctgtcgacaaacagaaagattca
cctatcaaggtacgttacaaggatggacttgctcctaaaggattagcagatcatcaggtt
actgaatcccaggctgctcctgataccatggaattgcgaaggaaaggagaggaaataaga
agtgataaatcttctgggagggtggttcctcccgaatcttcaacattgtataaagactct
tcagtaggtgatggaaaacgtccatcatacccaggacaaagtactgacgtgaagaatcgg
tctcgtccaaacaatgttaatagcaatcaacgtgatgcagatgatgttcaatatttaatt
ggaaaagttgatcataataatcagactgctccatatgattccagttctgagagaagtgat
aagcacaaaagtgaatataagaaaaggagaaagcataaaagatcagagaggaaggaggtt
gattcagatgatgatgacagttacgattctgaattggaggataggaaggaggcaaagagg
aggaggaggaaggatgaaaagaaactgcggaaggaggaaaaacgtaaacggcgtgaggaa
cggcgtcggagaagggaagagcggcgtgcagggaagctgaaagtgaagagtcaggatgat
gattacggttctgaggttgaacatactgcgaggatggagtctaatccaagcgatgatgaa
gagatgcagtctgagcagaagaggcttgagattgagttacgaaagaaggctctcgaatca
cttaaagcgaagaagggcatcagtcactaa
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