Juglans regia (English walnut): 108982604
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Entry
108982604 CDS
T05245
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
jre
Juglans regia (English walnut)
Pathway
jre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108982604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
108982604
Spliceosome [BR:
jre03041
]
Common components
Common spliceosomal components
SR proteins
108982604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RNA_bind
DbpA
RRM_Nup35
DUF2129
SET_assoc
Motif
Other DBs
NCBI-GeneID:
108982604
NCBI-ProteinID:
XP_018809583
UniProt:
A0A2I4DR08
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All DBs
Position
7:6318055..6322405
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AA seq
249 aa
AA seq
DB search
MNMRPIFCGNIEFDAKQSDVERLFRRYGRVERVDMKSGFAFVYMEDERDAEYAIRRLDRT
EFGRKGRRLRVEWTKHERGIRRPGGSRSSANVRPSKTLFVINFDPSYTRTRDLERHFDEY
GKILNIRIRRNFAFVQYESQEDATRALEATNMSKFMDRVISVEYAVRDDDEKRNGHSPDR
RGRDMSPDRRSYDHGRSPSPYRRDRASPDYGHGSSRPEARGSPKYDRVESPVNGRYDSRS
PPPRGRSRS
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgaggcccatcttttgcggcaacattgaatttgatgcaaagcagtctgatgtt
gagcgacttttcagaagatatggcagggttgagagggtggatatgaagtctggatttgct
ttcgtctatatggaagatgaacgagatgctgagtatgcaattcggagacttgacaggaca
gaatttggtcgaaagggccgccgacttcgtgttgagtggaccaagcacgagcgtggcatt
agaaggcccggcggttcaagatcttcagctaatgtgcgaccatcaaaaaccctgtttgtc
attaattttgatccaagttataccaggacaagggatctggagaggcattttgatgaatat
gggaaaatattgaacataaggatcagaaggaatttcgcatttgttcagtatgaatcacag
gaggatgctaccagagcattggaggcaacaaacatgagtaagttcatggatcgagtcatt
tcagtggaatatgcagttcgagatgacgacgagaaaagaaatgggcacagtcctgataga
agaggccgagacatgtctcccgataggagaagctatgatcatgggcgatccccaagtcca
tatcgtagggatagggctagtccagactacggccatggaagttccagacctgaagcaaga
ggaagtcccaagtacgacagagtcgagagccctgttaatgggagatatgacagccgttcg
cccccaccacggggaagatcccgttcctga
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