Juglans regia (English walnut): 108982724
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Entry
108982724 CDS
T05245
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
108982724
Spliceosome [BR:
jre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108982724
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
108982724
NCBI-ProteinID:
XP_018809723
UniProt:
A0A833TLR2
A0A2I4DRE8
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All DBs
Position
16:1175026..1182773
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AA seq
446 aa
AA seq
DB search
MASVSSQQQFRYTQPPSKVLHLRNLPWECIEEELIELGKPFGKVVNTKCNVGANRNQAFI
EFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGA
DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYL
LPEHVGPCNLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDGSGQLTVGLDGKKLE
PESNVLLASIENMQYAVTLDALHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK
EALEGHCIYDGGFCKLHISYSRHTDLSIRVNNDRSRDYTIPNNPVVNPQPSVLGNQSVSV
MGPTVQYNRTPFTPTPEHPVMPQPSAGWGHGVPPMPQSMPMQMHNNPYMPPGTMPFQVSP
GMMQSSIQSGIPQSSMLPRYGSGQMQ
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgtgtcgagtcagcaacagtttcgttacacccaacctccatcgaaggtgctt
catttgcgaaacttaccatgggagtgcattgaggaggaactgattgaacttggaaagcca
tttggtaaagttgtgaacacaaagtgcaatgttggagcgaacagaaatcaggcttttatt
gaattcgctgatttaaatcaagctattgcaatgatatcatattatgcatcatcctctgag
ccagctcaagtgcgtggcaaaactgtctacctacagtactcaaataggcaagaaatagta
aataacaaaactactgcagatgttgctgggaatgtactgttagttacaatagagggtgca
gatgcacgccttgtcagcattgatgtgttacatttggttttttcagcttttgggtttgtg
cataagattactacctttgagaagacagctggattccaggcgttggtacaattttcagat
acagaaactgcctcttctgcaaagaatgccttagatggaagaagcattcctaggtatctt
cttcctgagcatgttggaccctgcaaccttaggatcacgtattctgcacacacagatttg
agtgtgaaattccagagccatcggagcagggactatactaatccttaccttcctgttgct
ccttcagcgatagatggaagtggtcagttaactgtgggtttggatgggaaaaaactagaa
ccagagagtaacgtgcttcttgcatctattgaaaacatgcagtacgccgtcaccttggat
gctttacatatggtgttttctgcttttgggccggtccagaagattgccatgtttgataag
aatgggggcgtacaggcattgattcaataccctgatgttcaaactgccgttgttgccaag
gaagctttggaaggacactgcatctatgatggaggattttgcaagcttcacatctcatat
tcacgccatactgatctcagcattagggtcaataatgatcggagcagagactatacaatc
ccaaacaatcccgtggtgaacccccagccctcggttcttgggaaccagtcagtttcggta
atgggtcctaccgttcagtacaacaggactccattcactccaactccagagcaccctgtg
atgcctcagccttcagctgggtggggccatggtgttccaccaatgccgcagtccatgcca
atgcagatgcataataatccttacatgccacctgggacaatgccgtttcaagtttcccca
ggaatgatgcagtcatcgatccagagtggcataccacagtcatcgatgttgccccgttat
ggatctggccagatgcaatag
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