Juglans regia (English walnut): 108982901
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Entry
108982901 CDS
T05245
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jre03400
]
108982901
Enzymes [BR:
jre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108982901
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
108982901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_30
AAA_19
DEXQc_Suv3
Tc-R-P
Motif
Other DBs
NCBI-GeneID:
108982901
NCBI-ProteinID:
XP_018809929
UniProt:
A0A2I4DS06
A0A833Y493
LinkDB
All DBs
Position
2:complement(8115163..8159348)
Genome browser
AA seq
2090 aa
AA seq
DB search
MLVQLPRLTNTLRDPFDVDQAYLQRKLILQNYNRPRNSASSLDESELARKIVHRWEEASF
EVRQAYKQFIAAVVELIDGEMPSEEFHEVAVAVYRLFGMPVEEDSVDRNIAEKKLELQKI
LGHMVTDANLERVASLSQNLFGLVSTDHGSLHDLETHVNGSSNDLEFGADLIFQAPTRFL
LDVSLEVGELPSEESFAPYSSFHEGWFEHNDSQHNPCASNGGNFNLSWLRDACDRIVKEC
ASQLSRDELAMAICRVLDSDKPGEEIAGDLLDLVGDGAFETVQDILSHRKELVDAIHHGF
LVLKSEKTASNAQSRMPSYGTQVTVQTESEKQIDKLRRKEEKRQRRGTEYGAENDLSAAD
FSSLLQASETKNLLDDLVGSGPGAQSLAVTALPQGTVRKHYKGYEEVIIPPTPTAQMKPG
ERLIEIKELDDFAQAAFRGYKSLNRIQSRIFQTVYHTNENILVCAPTGAGKTNIAMISIL
HEIGQHFKDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNMTVRELTGDMQLSKNE
LEETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQV
ESTQTMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPVPLAQQYIGISEQNFAA
RNELLNEICYKKVVDSLRQGHQAMVFVHSRKDTAKTAQKLVELGRKYDDLEVFKNDTHPQ
FNLIKREVVKSRNKDLVELFEYGIGVHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWG
VNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHEKLAY
YLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRLNPLAYGI
GWDELVADPSLSSKQRSLVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSV
ETYNEMLRRHMNDSEVIDMVAHSSEFENIAVREEEQNELETLVRTSCPLEVKGGPSNKHG
KISILIQLYISRGSIDTFSLVSDAAYISASLARIMRALFEICLRRGWCEMSLFMLEYCKA
VDRKIWPHLHPLRQFDKDISSDILRKLEERGADLDRLQEMQEKDIGALIRYANGGKLVKQ
CLGYFPWIQLSATVSPITRTVLKVDLRITPEFIWKDRFHGATERWWILVEDSENDHIYYS
ELFTLTKRMARGEPQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYTISFHNLALPEAC
TSHTELLDLKPLPVTSLGNSTYEALYKFSHFNPIQTQSFHVLYHTDNNVLLGAPTGSGKT
ISAELAMLHLFNTQPDMKVIYIAPLKAIVRERMNDWKKRLVSQLGKEMVEMTGDYTPDLM
ALLSADIIISTPEKWDGISRNWHSRSYVKKVGLMILDEIHLLGADRGPILEVIVSRMRYI
SSQTERAVRFVGLSTALANAGDLADWLGVGETGLFNFKPSVRPVPLEVHIQGYPGKFYCP
RMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEQPRQFINILEEAL
QMVLSQITDQNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLP
AHLVIIKGTEYYDGKAKRYVDFPITDILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKF
LYEPFPVESSLKEQLHEHINAEIISGTICHKEDAVHYLTWTYLFRRLTVNPAYYGLENTG
PEILSSYLSSLVQNTFEDLEDSGCIKMSDDSVEPMMLGSIASQYYLSYMTVSMFGSNIGP
DTSLEVFLHILSAASEYDELPVRHNEENYNEALSKRVRYMVDRNRLDDPHVKANLLFQAH
FSQLELPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLLSSITCMHLLQMVMQGLWFDK
DSNLWMLPSMSDDLASLLNKRGISKVQQLLDLPNATLQTQVGNFPASRLYQDLQRFPRVQ
VRLKLQRKGSDDAKAPALNIKLEKINSKRNASRAFAPRFPKVKDEAWWLVLGNTFTSELY
ALKRVSFSDRMVTHMELPSTSTGLQGMKLIVVSDCYIGFEQEHSIDHLTY
NT seq
6273 nt
NT seq
+upstream
nt +downstream
nt
atgttggttcagcttcctcgcttgaccaacactctgagagaccccttcgacgttgatcag
gcctatctccaacggaaattaatcctccaaaactacaataggcctcgcaattctgcgagc
tcacttgatgagtcagagcttgcccggaagattgtacaccggtgggaagaagcctctttc
gaagttcgacaagcatacaagcagtttattgcagcagtagtggagttgattgatggtgaa
atgccctcagaagagtttcacgaggtggcagttgctgtatatcgtctttttggcatgcca
gtggaggaggacagtgttgatagaaacattgccgagaagaagttagaattgcaaaaaatt
cttggtcacatggttactgatgctaatctggagagagttgcctctctatctcaaaatctt
tttgggttggtatcaactgaccatgggtctctacatgatttggagacgcatgtaaatggg
agttctaatgatttagaatttggtgctgaccttatttttcaagcaccaacaaggtttctg
ttggatgtttctttggaggttggagaattaccgagtgaggaaagctttgctccttattct
tcgtttcatgaaggctggtttgaacataatgactctcaacataatccttgtgcttctaat
ggggggaactttaatttgagttggttaagagatgcatgtgatcggatagttaaggaatgt
gcctcacagctttccagggatgaactagcgatggcaatttgtcgggttcttgattcagac
aaacctggtgaggagattgctggtgatttgttggatcttgttggtgatggtgcgtttgag
actgttcaagacattttgtcgcaccgaaaggaacttgttgatgctatccatcatggattt
ctggtactgaaatctgaaaaaacggcttcaaatgctcaatcacgtatgccaagttatggt
actcaggttacagttcaaacagagtcggaaaagcaaattgataaacttcggcgcaaggag
gaaaaaagacagagaagaggaacagaatatggagctgagaatgacttgtctgctgctgat
ttttcttctttacttcaagcgagtgaaacaaaaaatcttcttgatgatctggttggatct
ggcccaggggcccagtccctagctgttactgctctccctcaaggaaccgtcaggaagcat
tataagggatatgaggaggtcattatccccccaacaccaaccgctcaaatgaaacctgga
gagagactgattgagataaaggagttagatgactttgctcaagcagcttttcgtggctac
aaatctctgaatcgcattcagagtcggatatttcaaacagtttatcacactaatgagaat
atactagtttgtgctccgacaggagctggcaaaacaaatattgctatgatttctattctc
catgagattggacagcacttcaaggatggttacttgcataaagatgagtttaagatagtt
tatgttgctcccatgaaggcattagctgcagaggtaacatcaacatttagccatcgctta
tctcctttgaacatgactgtgagagaacttactggagacatgcaactttctaagaatgaa
cttgaagaaactcagatgatagtgacaacacctgagaaatgggatgtcattacccgcaag
agcagtgacatgtcactttcaatgctggtgaagctcttaattattgatgaagtgcatctc
ttgaatgacgatagaggccctgtaatagaggcacttgttgctcggaccctccgtcaggtg
gagtcaacacaaacaatgatacgcatcgtggggctttcggccactctacctaattatttg
gaggtcgcgcaatttttgagagtgaatccagagatgggactcttcttctttgattctagc
tatcgtcccgttcctcttgctcaacagtatattggaattagtgagcagaactttgcagct
cgcaatgaattgttgaatgaaatatgctataaaaaggttgttgattcattaaggcaaggt
caccaggcaatggtgtttgttcattcacgaaaggacactgcaaaaacagcccagaaattg
gttgaacttggccgaaaatatgatgatctggaggtcttcaagaatgatacacatccacaa
tttaacttaataaagagggaagttgttaagtccagaaataaagatcttgtggagcttttt
gaatatggaattggtgttcatcatgctgggatgcttcgagcagacagaggtctgactgag
cgtcttttctctgatggactcttgaaggtactggtttgcacagcaacattggcatggggt
gtaaatctgccggctcacactgttgtaattaagggtacacaattatatgatccgaaggct
ggtgggtggcgagacctaggcatgcttgatgttatgcagatcttcggaagggctggtaga
cctcagtttgacaaaagtggtgaaggtataataatcacgtctcatgagaaattagcctac
tatctgcgattgctgacaagtcaactccccattgaaagtcagtttattagctccttgaaa
gataatttaaacgcagaagtagctttgggtacagtaactaatgttaaggaagcttgtgcg
tggcttggatatacatatctttttataaggatgaggttgaatcctctggcatatggtatt
ggatgggatgagcttgtcgccgatccttcgttaagttcaaagcaaagatctcttgtaaca
gatgctgcacgtgcacttgataaagcaaagatgatgcgctttgatgagaaaagtggcaat
ttttactgtactgagcttggtcgcattgcaagccacttttatattcaatactctagtgtt
gaaacttacaatgaaatgttgagacgccacatgaatgatagcgaggtaattgacatggtg
gctcactcttctgaatttgaaaacattgctgttcgagaagaggaacagaatgagttagag
acattggtgcggacatcatgcccgttagaagttaaaggtggtccttcaaataagcatggc
aaaatttccattctcattcagttgtacatatctcgaggctcaattgataccttctcattg
gtttctgatgctgcatatataagcgcaagcttggctcgtattatgagagctttatttgaa
atttgtttgcgaagaggctggtgtgagatgtctttgttcatgttggaatattgcaaggct
gtggatcggaaaatttggccccatctacatccccttagacaatttgacaaggatatttca
tcagacatacttcggaagcttgaagaacgaggggctgacttggatcgcctgcaggagatg
caggaaaaggacattggggcattgattcgttatgcaaatggaggaaagttggttaagcaa
tgtttaggatatttcccatggattcagttatcagcaactgtaagtccgatcaccagaact
gttttgaaggtggatctccgtataacgccagagtttatatggaaagatcgtttccatggt
gctactgagcgttggtggattctggttgaggactcagagaacgatcatatctactactca
gaacttttcactctgacaaagcggatggccagaggcgaacctcagaagctgtccttcact
gtgccaatatttgaaccacatccaccccaatattatatccgtgctgtttctgattcttgg
ttgcatgctgaggctttctacaccatttctttccataatctagcgctgccagaggcttgt
acttcacacacagaacttctagatttaaaacctctccctgtgacttcattgggcaacagt
acttatgaagctttgtacaagttttcacattttaatcctatacaaacacagagtttccat
gtcctttatcacactgacaacaatgtgctgttaggagctcccactggaagtgggaaaacc
atatctgctgagcttgccatgcttcacctctttaatactcagcctgacatgaaggttatt
tatatcgcaccattgaaggctatcgttcgggaaagaatgaatgattggaaaaagcgactt
gtctctcagcttgggaaggagatggttgaaatgactggagattatactccagatttgatg
gctctcttgtcagctgatatcataatatctactcctgagaagtgggatggtatcagtcgt
aattggcatagtcgaagctacgtcaaaaaggttgggcttatgattttggatgagattcac
ttattgggagctgatcgtggcccaatccttgaggttattgtttcaaggatgagatacata
tcatcacaaacagagcgtgcagtacgatttgtaggcctgtctactgctttagcaaatgcg
ggcgatttagccgattggttgggtgttggggaaaccggacttttcaacttcaagccaagt
gtgaggcctgtacctcttgaagttcatatacagggatatcctggaaagttctactgccca
aggatgaatagcatgaataaaccagcatatgctgctatatgcacccattcacctacaaaa
ccagttctgatatttgtttcatctcgtcgtcagacaaggctaactgctttggacctcatt
cagtttgcagcttcagacgaacaaccaaggcagtttattaatattctagaagaagcactt
cagatggttctttctcagatcactgatcagaacctgaggcacaccttacaatttggcatc
gggttacatcatgcaggtctgaatgacaaggacagatctcttgtagaggaactttttgca
aacaacaagattcaggtattggtttgtaccagcacattggcatggggtgtgaaccttcca
gctcatctggtcattatcaagggaacagaatattatgatggaaaagcaaagagatatgtt
gattttccaatcacggatatcttgcaaatgatgggtcgtgctggccgcccacaatttgat
caacatgggaaagcagtcattcttgtacatgaacccaaaaagagcttctataaaaagttt
ttgtacgaaccatttccagttgagagtagtctgaaagagcagttgcatgagcacatcaat
gcggagataatttctggcactatttgccataaggaggatgcagtccattaccttacctgg
acttacttattccgtagactgacagttaatccagcttactatggattggagaatacaggt
cctgaaattctaagctcatatttatctagcctagtgcaaaacacgtttgaggatctggaa
gacagtggatgcatcaagatgagtgatgacagcgtggagcctatgatgttgggttcaata
gcatctcagtattaccttagctacatgactgtatctatgtttggttcaaatataggtcca
gatacatcacttgaagtgttcctgcatatactctctgctgcctctgagtatgatgaactt
cctgtgcggcataatgaggaaaactacaatgaagcattgtccaagagagtgagatatatg
gtggataggaatcggttggatgatccacatgtcaaagcaaatctgctctttcaggcacat
ttttctcagttagaactaccaatcagtgactatgtcactgacttaaagtcggtgttggat
caaagtatacggatcatccaggccatgatagatatatgtgcaaacagtggatggcttttg
agctcaattacttgcatgcatcttttgcaaatggtcatgcagggattatggtttgacaag
gactccaacttatggatgttgccatccatgagtgacgatcttgcgagtctgttaaacaaa
agaggaatttccaaagtgcagcagctgttggatcttcccaacgcaactttgcagactcaa
gttggaaactttcctgcttcaagattatatcaggatttacaacgttttccacgtgttcaa
gtgagattaaaacttcaaagaaagggcagtgatgatgcaaaggctcccgctttgaacatc
aaattggagaagatcaattccaagcggaacgcatcaagagcttttgcccctcgatttcca
aaggtaaaagatgaagcatggtggttggttctgggtaacaccttcacatccgaattatat
gctctgaagagagtctctttctctgatcggatggtcacacacatggagttgccatcgact
tcgactggtcttcagggtatgaaattgattgtagtgtcagactgttatattggttttgaa
caagaacactccatcgaccaccttacttactga
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integrated database retrieval system
