Juglans regia (English walnut): 108983004
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Entry
108983004 CDS
T05245
Name
(RefSeq) KH domain-containing protein HEN4-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
108983004
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
108983004
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
MOEP19
Motif
Other DBs
NCBI-GeneID:
108983004
NCBI-ProteinID:
XP_035551627
UniProt:
A0A6P9FAI9
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Position
11:complement(5881665..5888870)
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AA seq
910 aa
AA seq
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MDDPSPCSSISDQPNAGVSSTLERKASFNNRDRPKRLQIKLLPGQVAFRFLIHVSDVGRL
LCNNGAVVSRIRRETSTRIHCEAVDPGSNLRVVLVVGFGSRDGRDVSSAQEAVLRVFESV
SEKVGDGGWDVVCWKMLAHTSQVGAVMGRGGQNIRRVRTETGAQIRILPAPHWMAEDDEL
IQITGDLLAVKKALVDVSSSLQDCPPFDKATTHMTRPLEDSPYGASPESQAHLIHVSSSL
PPPLPENSGTSASHGDTSPLSLPRYAERVVSGIDKKGSPQQEVVFRMLCSYHAAGWVIGK
RGAIVKALQNEAGASIMFAAPTNKSGERVVTISAWENLESSQSPAQNAVILVFTRMIEGV
IERGSLSGSSEGRPVMAKLLVVSDLVGCLGGNDGKVLTELREVTGADIRIVEGEHILTCG
SVNDTVVQITGDYKSVENALFQVTYSLRDNQLRAKYPYVRVSEDPFRTDTVPSNIGAISS
PPRLQLPQITGSISAMKKALNEVSTSLQDCFPIDKAPTPLTRSLRGSSYGSPDPHAELLP
HLSSPLPPLLGNSGNMALNDNTSLPIHADVVVSGQDKMGTEQEVVFRMLCSNHAAGCVIG
KRGAIVRALQNEAGASISFAAPLTESGERVVTISACENLESSYSPAQIAVGRVFARIIEG
FIEKGFLSGLGDRRAVTAKLLVASDFVGHLSGNGGKLLSEMRRATDADIQILEGEHILNC
VLMSDLVVQITGEFRSVQNALFQVTGSIRDHLLLSGVFREVTVKSPHLRLSEGPLRNEPV
PHNVSAPSSPRFQLPQTAGSGQTTAISDSEGGITTFRGDSELGSGKKLATVTATTVEIKI
SEHVFGSVYGEDGSNLDRIKQISGAKVEVHDPRPGEREGRVVISGTPDKTFAAQSLLHAF
IQSAKKTPYN
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggacgatccgagtccctgttcatcaatttcagaccaaccgaacgccggcgtttcctcc
acgctagaacgcaaggcctcgttcaacaaccgggatcgtcccaagcgcctacagatcaaa
ctcttaccgggccaggttgccttccgcttcctcatccacgtctctgacgttggccgactc
ctttgcaacaacggcgccgtcgtctcccgtatccgccgagagacgtccaccagaatccac
tgcgaggcggtcgatcccggttccaacctccgggtcgtcctcgtcgttggatttgggtcg
agagatgggcgggacgtttcgagtgctcaggaggccgtccttagggttttcgagagcgta
tcggaaaaggtaggggatgggggctgggacgttgtttgttggaaaatgctagcgcacacg
tctcaggttggtgcggtgatggggagaggagggcaaaacattagaagagtgaggactgag
accggtgctcagattaggatcttgccggccccgcattggatggctgaggacgacgaattg
attcagattacgggtgaccttttggctgtaaagaaagccctggttgatgtttctagcagt
ctccaagattgtccaccgtttgataaagccacaacccatatgacgagacctcttgaggat
tctccctacggagcctctcccgaatcacaggcacatcttatacatgttagttcatcgtta
ccgccgcctttgcctgaaaactcaggaactagtgcttcgcacggcgatacgtcaccgttg
tccttgccgagatatgccgaaagagtagtctctggcatagacaaaaagggctctccccaa
caagaggttgtgttcagaatgctctgttcttatcatgcggctgggtgggtgattggcaaa
agaggggccattgtcaaagccctgcaaaatgaagctggtgcatctataatgtttgcagct
cctacaaataagtccggcgagcgtgtggtcaccatttctgcttgggagaaccttgaatca
tcacagtctcctgcacaaaatgctgtaattcttgtcttcactagaatgattgagggtgtc
attgaaaggggatctctatcaggctctagtgagggtagacctgtaatggctaagcttcta
gttgtatcagatttggttggttgtttgggtggcaatgatggtaaggtacttacagaattg
agagaagtcactggtgctgatatacggatagtggaaggggagcacattctgacttgtggt
tcagtgaatgatacagtagtacagattacaggagattacaagagtgttgagaatgctctg
tttcaagttacttatagtctgagggataatcaattgagagcaaagtacccctatgtaaga
gtgagtgaagacccttttagaactgatactgttcccagcaacataggtgctatttcttca
ccaccgaggttgcagctgccacagattacaggcagcatttcagctatgaagaaagcactg
aatgaggtttctacctctctccaagattgttttccaatagacaaagccccaaccccttta
accagatctcttaggggctcttcctatggatctcctgatccacatgcagagctgttacca
catcttagttcaccgttaccacctttgcttggaaattcaggaaatatggccttaaatgac
aatacatcattgccgatacatgctgatgtagtagtttctggccaggacaaaatgggtaca
gaacaagaagttgtgttcaggatgctgtgttcgaatcatgcagctgggtgtgtgattggc
aaaagaggggccatagtcagagcactgcagaatgaagctggtgcttctatatcatttgca
gctcctttaacagagtctggtgagcgtgtggtcaccatctctgcatgtgagaaccttgaa
tcatcatactctcctgcacaaattgctgtgggtcgtgtcttcgctagaatcattgagggt
tttattgaaaagggattcctgtcaggcttgggtgaccgtcgagcagtaacagctaagctt
ctagttgcatcagattttgttggtcatttgagtgggaatggtggtaagctactttccgaa
atgagaagagccacggatgctgatatacagatattggaaggggagcacattctaaattgt
gttttaatgagtgatttagtagtacagattacaggagagtttagaagtgtacagaatgct
ctgtttcaagtcactggcagtatcagggatcatctattactcagtggggttttcagggaa
gtgactgtgaagtccccccatttaagattgagtgagggccctctgagaaatgagcctgtt
ccccataacgtaagtgctccttcttcaccaaggtttcagctgccgcagactgcaggaagt
ggacaaacaacagcaatctcagacagtgaaggaggcatcacaacctttaggggggattca
gagcttgggagtggaaagaaacttgctactgtgacagcgacaactgttgagattaagatc
tctgaacatgtttttggctctgtttacggtgaagatgggagtaacttggatcgcataaaa
cagatttcaggagcaaaagtcgaggtgcatgatcctcgtcctggcgaaagagaagggagg
gtcgttatatcagggacacctgataaaacctttgcagcccagagcttgcttcacgccttc
atacaatctgcaaagaaaacaccatataattga
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