Juglans regia (English walnut): 108983285
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Entry
108983285 CDS
T05245
Name
(RefSeq) ABC transporter B family member 28 isoform X1
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
jre
Juglans regia (English walnut)
Pathway
jre02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108983285
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jre02000
]
108983285
Transporters [BR:
jre02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
108983285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_21
AAA_5
AAA_16
AAA_30
AAA_29
RsgA_GTPase
AAA_25
AAA_28
Rad17
nSTAND1
AAA_33
AAA_15
SKA2
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
108983285
NCBI-ProteinID:
XP_018810410
UniProt:
A0A833TE18
A0A2I4DTD3
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All DBs
Position
10:6080159..6089225
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AA seq
714 aa
AA seq
DB search
MASATLSFSPIHYPTRVRTHKSRLSLSFLPLPFQSHPFPPLPLGSITAPAKTRGSVSFAY
VSGPASDPNVTESGPRVDPQDSRPEKVRPARAISWGLLWSLLGAHKLRLAISALTLLGCT
TCTLSMPIFTGRFFEVLIGARPEPLWKLLSKVGLSYALEPILTVIFVTNLNTVWEKVMST
IRAQIFRRMLIQKAEFFDRYKVGELTGLLTSDLGSLKDVVSENVSRDRGFRALSEVTGTL
LILFALSPQLAPILGLLILAVSVLVAVYKRSTVPVFKAHGLAQASISDCVTETFSAIRTV
RSFGGEKHQMSMFGSQVLSYQASGIKLGAFKSINESVTRIAVYISLMALYILGGSKVKAG
ELSVGTVASFIGYTFTLTFAVQGLVNTLSDLRGTFAAVERINSVLSEVEIDEALAYGLER
EMQHKEVHDDSYKLFLINGYDENILSKNMHYMSALKSSSKVSSLAWSGDVGLEDVHFSYP
LRPDVEILNGLRLTLKRGTITALVGPSGAGKSTVVQLLARFYEPTRGRITVAGEDVRTFD
KSEWARVVSIVNQEPVLFSVSVGENIAYGLPDEDVSKDDVIKAAKAANAHEFIISLPQGY
DTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDAISERLVQDALNHLMKDR
TTLVIAHRLSTVQNAHQIALCSDGRVTELGTHFELLARKGQYASLVGTQRLAFE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgcaactctctccttctctcccattcactatcccactcgcgtccgtacgcac
aaatctagactctccctctcctttctcccccttcccttccaatcacaccccttcccgcca
ttgccactcgggtcaataaccgcaccagctaagaccaggggctcagtctctttcgcttac
gtgtccggacccgcttcggaccccaacgtaaccgagtccggcccgagggtcgacccgcag
gattcacgtcccgagaaggttcggccggcgagggccataagctgggggctactctggagt
ctcttgggtgcacacaagctgaggctcgctatttcggctttgactcttcttggttgcacc
acctgtactctctctatgcccatatttactggtagattctttgaagtacttattggtgct
agacctgagccattgtggaagctgctcagtaaggtcggactttcgtatgcgctggaacca
attttaacggttatttttgttacaaacctgaacactgtatgggagaaagttatgtcgacg
ataagagctcagattttcagaaggatgttgattcagaaggcggagttttttgaccgatac
aaggttggtgaacttactggtttgctaacatctgatttgggttctcttaaagatgttgtg
agtgagaatgtttcaagggaccgtggattcagggcactttctgaggtcactgggacatta
ttgatactatttgccttgtcccctcaacttgcacctattctgggcctgctaatacttgct
gtgtctgttttagttgctgtgtacaagagatcaactgtgcctgtttttaaagctcatggg
ttggcccaggcatccatatctgattgcgtgacagaaacattttctgccattcgtactgtc
agatcctttggtggtgaaaagcatcaaatgtcaatgtttggtagccaggttctttcttat
caggctagtggcataaagcttggggcttttaaatccataaatgaatctgtgacaagaatt
gccgtttacatttctctaatggccttatatattcttggaggaagcaaagtgaaagcgggt
gaactttctgtcggaaccgtggcttcttttattggatacacattcacattaacatttgca
gttcaagggctggtgaacacacttagtgatcttcgtggaactttcgctgctgttgagaga
attaactctgttttgtctgaggttgaaattgatgaggcccttgcatatggtttagaaaga
gaaatgcagcataaagaagtgcatgatgacagttataaattattcctcataaacggttat
gatgagaacatcctctctaagaatatgcattatatgtcagccctgaaatcatctagcaaa
gtgtctagcttagcttggtctggtgatgttggtctcgaagatgtccacttctcttatcct
ttgagacccgatgtggaaatactgaatggtctacgtttaactctaaaacgtggaaccata
acagctcttgtgggcccaagtggtgcgggcaaaagtacagtagtacagctattggcacgt
ttctatgagccaaccagaggtcgtataacagttgctggagaagatgttcgaacatttgac
aagagtgagtgggcacgggttgtttcaatagtgaatcaggaaccggttcttttttcggta
tctgttggagaaaatattgcatatgggcttccagacgaagatgtatccaaagatgatgtg
ataaaggcagccaaagcagcaaatgctcatgaattcataatttcactgccgcagggttat
gacacacttgttggtgagcgtggaggactactgagtggaggccagaggcagagaattgct
attgctagagctctgcttaagaatgcccccattctaatacttgatgaggctaccagtgcg
ttggatgcaatcagtgagcgcttggtccaggatgcattgaaccatctgatgaaggacagg
acaacattggtgattgctcaccgattaagcactgttcagaatgcccatcaaatcgcgctt
tgttccgacgggagggtcacagaactcgggacacactttgaattattggctagaaagggt
caatatgcttcattggtcgggactcaaaggctggcatttgagtga
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