Juglans regia (English walnut): 108983627
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Entry
108983627 CDS
T05245
Name
(RefSeq) probable RNA-dependent RNA polymerase 1
KO
K11699
RNA-dependent RNA polymerase [EC:
2.7.7.48
]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
jre03036
]
108983627
Enzymes [BR:
jre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.48 RNA-directed RNA polymerase
108983627
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
108983627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdRP
Motif
Other DBs
NCBI-GeneID:
108983627
NCBI-ProteinID:
XP_035543648
UniProt:
A0A6P9EHP6
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Position
2:complement(35693638..35705246)
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AA seq
1123 aa
AA seq
DB search
MVPNMEDERLRYRIRETTLIGRRYEAKSDSSTNLAAYWCTVMVSCTELENSLALVSLIDL
GNKRSKKSCLKWGQLVTPLPSAFLMFLSNAVICIELCNACVTVFLVSGDSFSVLWKLEDV
SGKFDFENKNLCFIFSHLSVKYKFEISFENIWKIELYLPRGQATNFLLIQLLGAPRIYVK
DVSDVGRYEWVREVDFTPSRCIGQSYALCLELPKKRRLQKLHLDFFHYQENKNQFRLIEG
SPYSFSSVLVPIVNPPTGFDLPYKILFKINSLIQHGCVPGPAIVDDFYRLVDPKKIKFEN
MIESALDKLFHLKDCCYEPVKWLMEEYKRYAASTRFQKTPAISLDDGLVYIHRVQITPSK
VYFGGPEVSLSNRVLRRYPEDIDNFLRVSFVDEDLDKIHSITLAPRSSSANEDKRTRVYD
RILSTLRNGIVIGDKKFEFLAFSSSQVRENSVWMFASRPGLTAADIREWMGDFRDIRNVA
KYGARLGQSFGSSRETVSVGIDEIKVIPDVEIKKGQVTYCFSDGIGKISEELARKVATKL
PCSSVPSAFQIRHGGYKGVVALDPTSSVKLSLRKSMCKYKSDNTKLDVLAWSKFQPCFLN
RQIIILLSNLGVKDRAFLKRQREAIDQLNAILIDPLGAQEALEMMFAGEISKVLKEMLIC
GYKPDAEPFLSMMLQTFRASKLMDMRLRTRIFVPNGRALMGCLDETRTLEYGQVFLQVSR
FSRELSNFICEGKVVVAKNPCLHPGDVRVLEAVNVPVLHHMVDCVVFPQKGKRPHPNECS
GSDLDGDTYFVSWDLDLIPPRQIEPMEYIAAPTKQADHDVTIEEVEEYFTDYMVNDNLGI
IDNAHVVFADSEPRKAMSPKCMELAKLHSIAVDFPKTGIVAEIPDYLHVKEYPDFMEKPN
KKSYISKSVIGKLFREVKDIALPTSPAESFTLDLAKQHYDPEMEVDGFEDYLSDAFKYKS
DYDYKLRNMMEYYGIQTEAEILSGNVLKMSKHFDRKRDVDAIKYAVKSLRMEARNWFNEG
SDADNITDNAKAKASAWYHVTYHHTYWGRRYAEETQGMDRAHFLSFPWCIYDKLLQIKKD
KKSKSGFWFCVIFLIFAFLVPIVLWLSLSGFFGGLILVFYRYL
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggtacccaatatggaggatgagcgcctccgatacaggatacgggaaaccaccttaatt
ggtaggagatatgaggcaaagagcgacagttcaacaaatctggccgcgtattggtgcact
gtcatggtctcctgcactgagttggaaaactccctggccctagtgtctctgattgatctg
ggaaataagcgatcaaagaaaagttgcttgaagtggggccagctagtaactcccctccca
tcagctttcctgatgtttctttcaaatgcagtaatatgcattgaattgtgtaatgcatgt
gttacagttttcttggtttcgggggacagtttttctgtgctttggaaactggaagatgtc
tctgggaaatttgattttgaaaacaaaaacttgtgcttcattttttcccatctttccgta
aagtacaagtttgagatctcttttgagaacatttggaagattgagctatatcttccacgt
ggtcaagcaacaaactttcttctcattcagttactaggtgctccaaggatatatgtgaaa
gatgtatctgatgttggtcgttatgagtgggtcagagaagttgatttcactccatccaga
tgcattggccaatcttatgctctatgtttggagcttccaaaaaagaggcggcttcagaaa
ttacatcttgattttttccattatcaagaaaataaaaaccaatttagattgatagaaggt
tctccttactcattcagttcagttcttgtgcccattgtgaatccacccacaggctttgac
ctaccatataaaatcttgtttaagatcaactctttgattcagcatggatgtgttcctggg
ccagcaattgttgacgatttttataggttggtcgatccaaagaaaatcaaattcgagaac
atgatagaaagtgccctggacaagctttttcatttgaaggactgctgctatgaacctgtg
aagtggctcatggaggagtacaaaagatacgcagcatctactcgatttcaaaaaactcct
gctatttctttagatgatgggctggtatatatacacagggttcaaattactccatctaaa
gtatacttcggtggtccggaggtgagtctctccaacagagtcttgcgccgttaccctgaa
gatattgataattttctgcgtgtttcttttgtcgatgaggacttagataaaatccactca
ataactttagctccacgttcatcatctgcaaacgaggacaagcgaactagagtttatgat
aggatactatccactctcagaaatggaatagttattggggacaagaagtttgagtttctt
gccttttcatccagtcaagtacgagaaaattctgtttggatgtttgcttcaagacctggc
ttgactgcagcagatattagagaatggatgggtgattttcgagatataaggaatgtggca
aaatatggtgccagactgggtcagtcttttggctcttctagagaaactgtcagcgttggc
atagatgaaattaaagttattcccgatgtagaaattaagaagggacaagtcacatattgt
ttctcagatggcatagggaagatatctgaagaattggctcgcaaagtggcaacaaagtta
ccctgcagctctgttccatcagcatttcagattcgacatggagggtacaaaggtgttgtg
gctttagatccgacatcatcggtgaagttgtcattgagaaagagcatgtgtaaatacaaa
tcggataacacaaaactcgatgttttggcatggagtaagtttcagccatgttttctcaat
cgtcagataataattcttttgtctaacctcggggttaaggatcgagcttttctaaaaagg
caaagggaggctatagatcaactgaatgccatattaatagatcctttgggagcacaggag
gcactggaaatgatgttcgcaggggagatctcaaaagttctaaaggaaatgcttatatgt
ggttacaagccagatgcagaaccatttctttcaatgatgcttcaaacattccgtgcatct
aagttgatggacatgcggttgagaacaaggatttttgttccaaatggaagagctttgatg
ggatgccttgacgaaaccaggacattggaatatggtcaagtatttctgcaagtttctcgc
tttagtagggagctcagtaacttcatctgtgaaggtaaggtggtggttgctaaaaaccct
tgtctacacccaggagatgtgagagtcctcgaagctgtgaacgtgccagttctacatcat
atggtggattgtgttgtttttccacaaaagggaaagagaccacatccaaacgaatgttcg
ggaagtgatttggatggagatacgtacttcgtctcttgggatcttgatcttattcctcct
cgtcaaattgaaccaatggaatatattgcagcaccaactaagcaagctgatcatgatgtt
acaatagaggaagtagaagagtatttcacagactacatggtcaacgacaatttaggaatc
atcgataatgcccacgtcgtctttgcagatagcgagcccaggaaagcaatgagccctaaa
tgtatggagcttgcgaagcttcactcaattgctgttgacttcccaaaaactggtattgta
gccgaaatacctgattatctacacgtcaaagagtatccagactttatggaaaagcctaat
aaaaagagctacatatcaaaatctgttatcggaaagctttttcgagaagtgaaagacatt
gcattgcccacgagtcctgcggaatccttcactttggatttagcaaaacaacattatgac
cctgaaatggaagtagacggctttgaggactacctcagtgatgctttcaaatacaaaagt
gactatgattacaagttgaggaatatgatggagtattatggaatccaaactgaagccgaa
attctcagcggcaatgttttgaaaatgtcaaaacattttgataggaagagggatgtggat
gcaattaaatatgctgtaaagtcactaagaatggaagccaggaactggttcaacgagggg
agtgatgcagacaatattactgataatgcaaaagcaaaagcatcagcctggtatcatgtc
acatatcatcatacttactggggtcgacgctacgctgaggaaactcagggaatggatagg
gctcatttccttagttttccatggtgtatctatgacaagcttctgcaaatcaagaaggat
aaaaagagcaaatcaggtttttggttttgtgttattttcttaatttttgctttcttggtg
ccaattgtattgtggttgagtttatctggtttttttggaggcctgattttggttttttat
cgatatttgtag
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