Juglans regia (English walnut): 108983680
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Entry
108983680 CDS
T05245
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
jre
Juglans regia (English walnut)
Pathway
jre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108983680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
108983680
Spliceosome [BR:
jre03041
]
Common components
Common spliceosomal components
SR proteins
108983680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Transformer
RRM_3
Motif
Other DBs
NCBI-GeneID:
108983680
NCBI-ProteinID:
XP_018810942
UniProt:
A0A2I4DUX3
A0A833X7L0
LinkDB
All DBs
Position
15:14934963..14941924
Genome browser
AA seq
266 aa
AA seq
DB search
MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRILDIELKIPPRPPCYCFVEFDNARDAED
AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGGYGGGSGGGGGGGSGGGGSGGGRFGIS
RHSEFRVVVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIR
KLDDTEFRNPWARGYIRVKKYEGSPIRSRSRSRSRSRSERRDRSKSLERSISRSVSRSRS
ASPVKSFRPRSRSRSGSPLQARSDSG
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgtttttctcgcacaatctatgttggaaacctgccctcagatataagagaa
tcagaaattgaagatctattctacaagtatggccgtatattggatattgaattgaagatt
ccgccccgccctccatgttattgttttgtggagtttgataatgctcgggatgcagaagat
gcaatccggggtcgtgatggctataactttgatggttgtcggttgagggttgaactcgcc
catggcggtagagggccatcttcaagtgatcgtcgtggtggctatggtggcggcagcggc
ggcggcggtggcggaggcagcggaggtggcggcagtggtggtggccgatttggtatctca
cgccattctgaatttcgagttgttgtccgtgggctcccttcttctgcttcctggcaagat
ttgaaggatcatatgcggaaagctggtgatgtatgttttgcagaggtatcccgtgacagt
gaagggacctttggaattgttgattacactaattatgatgacatgaaatatgctattcgg
aagcttgatgacaccgaattcagaaatccttgggcaagaggttatattcgggtcaagaag
tacgagggcagtcccataaggagccgaagtagaagccgcagccgaagcagaagtgaaagg
agggacaggagtaaatcattggaacgctctatttctagatcggtatcaagatccagatct
gcatctcctgtcaaatctttcaggccaagatcaagatcaaggtcaggatctcctctccag
gcccggtcagatagtggctga
DBGET
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