Juglans regia (English walnut): 108984033
Help
Entry
108984033 CDS
T05245
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre00040
Pentose and glucuronate interconversions
jre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108984033
Enzymes [BR:
jre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
108984033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
108984033
NCBI-ProteinID:
XP_018811405
UniProt:
A0A2I4DW92
A0A833UD77
LinkDB
All DBs
Position
12:29038843..29043594
Genome browser
AA seq
499 aa
AA seq
DB search
MLLPTTCILLICFLLSSPFFLTKATLNLTLPHQHPDPEAVVQAVQRSVNASLSRRQMLSL
QGKDQRSKCLTGNPIDDCWRCDSDWQKNRQRLADCAIGFGHNALGGKGGQIYIVTDSSDR
DPANPVPGTLRHAVVQEEPLWIVFTADMTIKLKHELIVNSYKTIDGRGANVHIVGNGCIT
LQYVSNVIIHNIHVHHCKPSGNTNIRSSPTHVGWRGKSDGDGISISGARLIWIDHCSLSY
CTDGLIDAIMGSTGITISNNYFSHHNDVMLLGHNDRYALDSGMQITIAFNHFGEALVQRM
PRCRRGYIHIVNNDFTQWEMYAIGGSANPTINSQGNRYNAPPDQNAKEVTKRVETDQSEW
TGWNWRTEGDIMVNGAFFVPSGAGLSAQYAMASSVEPKAAGLIDQLTMNAGVLGGPRESS
QSISYPGYNGGGTGTGTTYTGNSGSGGDGDYFGMIFGGGAMAAAPPAAPSSTSIILPLVI
ILIWHATTGLHLLLSFPLL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttcctaccacctgcattctcctcatatgtttcctcttaagctctccgttcttc
ctcaccaaagctaccctcaatctcacactccctcaccaacaccccgaccctgaagctgtt
gtccaagcagttcaaaggagcgtcaatgcctctctctcccggagacaaatgctctctctt
caaggaaaggaccaacgttccaaatgcctcaccggcaaccccatcgacgattgttggcgc
tgcgactcagactggcaaaaaaaccgccaaaggctcgccgactgcgccatcggatttgga
cataacgccctcggtggtaaaggaggtcagatctacatagtcactgactcgtccgaccgt
gacccggctaatccggtccccggtaccctccgccacgctgtggtccaagaagaacctctc
tggattgtattcactgcggacatgaccataaagctgaaacacgagctgatcgtcaatagc
tacaagaccatcgacggtcgcggtgcgaacgtccacatcgtgggtaacggctgtatcacg
ctgcagtacgtgtctaacgtcatcatccacaacatccacgttcaccactgcaagccgtcg
gggaacacgaatatacggtcatctccgacgcacgtcgggtggagggggaaatcggacggc
gacggtatatccatatccggagcgcgactgatctggattgaccactgctccttgtcctac
tgcacggacggcttgattgacgccataatggggtcgacgggaatcaccatctccaacaac
tatttctcgcaccacaacgacgtgatgctgttgggccacaacgatcgctacgccttggac
tcgggcatgcagatcaccatagcgttcaatcatttcggcgaggcgctggtgcagcgtatg
cctcgttgcagacgggggtacatacacatcgttaacaacgatttcacgcagtgggagatg
tacgccatcgggggtagtgctaaccccaccattaatagtcagggtaatcggtataatgca
ccgccggaccaaaacgccaaggaggtgacgaagcgcgtggaaacagaccagagtgagtgg
acgggctggaactggaggacggagggggacataatggtaaatggagcgttctttgtgcca
tcaggggcaggcctcagcgcccagtacgccatggcctccagtgtggagcccaaggccgct
gggctaattgaccagctcactatgaacgctggtgttcttggtgggcccagggagagcagt
cagagcatatcatacccaggatacaatggtggagggaccggcacgggaactacctacacc
ggaaattctgggtccggtggtgatggagactactttggaatgatatttgggggcggcgcc
atggcagcggcaccacccgcagccccatcttctacttcaatcattttaccccttgtaatt
attttaatttggcacgctaccactggtcttcatctcctattatcgtttcccttattatga
DBGET
integrated database retrieval system
