Juglans regia (English walnut): 108984161
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Entry
108984161 CDS
T05245
Name
(RefSeq) bromodomain and WD repeat-containing protein 1-like
KO
K11797
PH-interacting protein
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jre04121
]
108984161
Ubiquitin system [BR:
jre04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108984161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
NBCH_WD40
Bromodomain
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
VPS8_N
Auxin_resp
WDR90_beta-prop_4th
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
108984161
NCBI-ProteinID:
XP_035548562
UniProt:
A0A6P9F1A7
LinkDB
All DBs
Position
7:complement(16249371..16292099)
Genome browser
AA seq
1729 aa
AA seq
DB search
MALRKYIPSGAAQKDMKPLRFSFKGHENSELADPETSHTMEHEVDVDLREVYFLIMHFLS
AGPCHRTYGQFWNELLEHQLLPRRYHAWYARNGNGTHSGVENDDGMSVPLSYTMLVERYP
HVEKDHLVKLLKQLLLSAAPPPRDISGRNAPSAADVPTLLGMGSFSLLSYDRDKGNNDVN
RPPGYMRWPHMKADQVRGLGLREIGGGFTRHCRAPSIRAASYAIAKPSTMVQKMQNIKRL
RGHRNSVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNAL
VASSSNDCTIRVWCLPDGFPISVLKGHTGAVTAIAFSPKPNSVYHLLSSSDDGTCRIWDA
RNSQLSPSIYIPRPSDSLAGKNNAPSSSIVPQSHQIFCCAFNANGTVFVTGSSDTLARVW
NACKPNADDSDQPNHEIDVLSGHENDVNYVQFSGCAAASRFTTSDTLREDNVPKFRNFWF
THDNIVTCSRDGSAIIWIPRSRRSHGKAGRWTRAYHLKVPPPPMPPQPPRGGPRQRMLPT
PRGVNMIVWSLDKRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRMAM
SAGYDGKTIVWDIWEGTPIRIYDTSRFKLVDGKFSPDGTSIILSDDVGQLYILNTGQGES
LIDAKYDQFFLGDYRPLIYDAHGNAVDQETQLPPYRRNMEDLLCGSDMIPYPEPYQTAYQ
RRRLGALGKEWHPSLRLAVGPDFTIDPDYQMLPLADLDVLPEPLPHFVDAMDWEPEIEVQ
SDDTDSEYNVPGDYSTGGEQGSFGSISSGDPECSAEDSEADTQMDSLRRSKRKKHKAEVD
IMTSSGRRVKRRNLDEGDGNPIRCNQTRKSRNGRKASKRKSSTSKSFRPQRAAARNALNL
FSKITGTSTDGEGEDGSENFSESESTLQDSIVESDESDRPLENEETKHLKGKEVSLGESK
DVEHSELPESCIDSGNRKRLVLKLPIRDSNKLLLSGRTLHKSNYQADLMGSSSKAPQETI
EESSNHKNSRDLGYCSGDVNGSIIERKGRKRLDKVEDHLNLSESYNNRQIKWGGAKARTS
RHLRFGEGMSSGANVRSHASLVGHDEKENNVEGHVKSRKDCDAISPCLEILNYGDNMDGL
PLTEETNIVATTSEGFNGESPKSVHMVAQDSTTSLQYKDGNDQHHEQNETMRIRSRRIST
DPESPKQERTFSVENQDNSWHASPSDKEQDPVVPTDETIRINTDHGDETQELDTQMNNNS
VSIVQDSQVLHSNRNKMYTAVYKRSKSNRSRANLEIDSGGMGESNSHVSNQSLTVGLDSQ
GSIDGARRTRSMGPKASTRDSDIVIDSLKSQQGHESGHFRSTRNSSTDRCQLPSEKWGSS
SRMTVGLRSTRNRRSSNYACEGSPLDRRKSHQSARKGSWLLLSKHEEGSRYIPQQGDEVV
YLRQGHQEYINYFNSKELGHWRTMMGSLDLSKEMMGNIRAVEFCRVESLEYSSLAGSGDS
CCKMTLQFVDPTSSLCHISFKLTLPEVTGFPDFLVERTRFDAAMQKRWSFRDKCRVWWKN
EGEEDGSLWDGRIVSVKAKSEEFPDSPWERYTVQYKSDPRERHNHSPWELYDADTQWEQP
HIDDEIRNKLLSAFAKLEQSGNKPEDRYGVQKLKNVADKSYFTNRFPVPLSLEVIQARLE
NNYYRSLEALNHDISVMSSNAKIYFGKNAEMSDKIDRLSDWFMRTLSSL
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atggctcttaggaaatacattccgtctggtgctgcacagaaggatatgaaaccattgaga
ttttcctttaaaggacatgagaattctgaacttgcagatccagagacaagtcatacaatg
gagcatgaagtggatgttgacctcagagaagtttattttcttattatgcattttctttca
gctgggccatgtcatagaacttatggacagttttggaatgaactgcttgaacatcaactt
ttacccagaagatatcatgcttggtatgcaaggaatgggaatgggacacatagtggggtt
gaaaatgatgatggcatgtcagttccgttaagttacaccatgttggtcgagaggtatcct
cacgttgaaaaggatcacttggtaaagcttttgaagcagctattactaagtgcagctcct
ccaccgcgcgatatcagtggtagaaatgctccaagtgcagctgatgtacctactcttctt
gggatgggttcattttcacttttaagctatgatagggacaaaggaaataatgatgtcaat
cgaccccctggttacatgcgttggcctcatatgaaagctgatcaggttcgtggtctaggt
ttgagggaaatagggggtggtttcacaagacattgtcgtgcaccatctattcgtgcagca
agttatgccattgcaaaaccatctaccatggtacagaaaatgcaaaatatcaagaggcta
agggggcataggaattctgtatattgtgcaatattcgatcgctctgggagatatgttatt
actggctcagatgatcgccttgtaaaaatttggtcaatggaaacagcttattgtctggcc
agctgccgtggacatgaaggtgacatcactgacttggccgtgagttccaacaatgctttg
gtggcatcctcttcaaatgactgtaccattcgagtttggtgtttgccagatgggtttccc
atttcggttctgaagggacatactggagctgtcactgctattgcattcagccccaagcct
aattctgtttaccaccttctatcgtcatctgatgatggaacatgtaggatatgggatgct
aggaattcccagttgagtccaagtatatatattccaaggccttcagattctctagcaggg
aaaaacaatgctccatcctcaagtattgttccacagagccatcaaattttttgttgtgca
tttaatgctaatggaaccgtctttgttactggcagctctgacacacttgcaagggtatgg
aatgcttgtaaaccaaatgcagatgattcagaccaaccaaatcatgaaattgatgtgtta
tctggccacgagaatgatgtcaattatgtgcaatttagtggatgtgctgcagcatctaga
tttactacgtctgacaccttgagagaagataatgttccaaaatttaggaacttctggttt
actcatgacaacatagttacctgttctcgtgatggcagtgctattatttggattccaaga
tcacgtagatcacatgggaaagctggccgttggacaagagcttatcatcttaaagttcca
cctccgccaatgccgcctcaacctccacgagggggtcctcgtcagaggatgcttccaacc
ccccggggcgttaatatgattgtttggagcctagacaagcgctttgtccttgctgctatc
atggattgcagaatttgtgtttggaatgctgctgatggtagcttagtgcattctttgaca
ggtcatactgaatctacatatgttctggatgttcatcccttcaatccacgaatggccatg
agcgctggttatgatggaaaaaccatagtgtgggatatatgggaaggcacacctattcga
atatatgacacttcacgtttcaagctggtagatggcaagttttcaccggatgggacgtca
attatactctcggatgatgttggtcaactgtatatactaaacacagggcaaggagagtcc
ctaatagatgccaaatatgatcagttcttccttggtgattatcgcccccttatttatgat
gctcatggaaatgcagttgaccaggaaactcagcttccgccataccggaggaacatggaa
gatctcctttgtggctcagacatgataccgtacccagaaccctatcagactgcataccag
cgaagacgattaggagctctgggcaaagaatggcatccttctttgagacttgctgtgggg
cctgatttcaccatagatccagactaccaaatgctgcctttggcagacttggatgtattg
cctgaaccactgccacattttgtggatgccatggattgggaaccagaaattgaagtacaa
agtgatgatactgattcagagtacaatgttcctggtgattattctactggaggagagcaa
ggaagcttcggttcaatttcctctggcgatccagagtgcagtgcagaagacagtgaggct
gacactcaaatggacagccttcgtagatcaaagaggaaaaaacataaggcagaagttgac
ataatgacttcctctgggaggagggttaaaaggaggaatctggatgagggtgatggcaat
ccaatcagatgtaaccaaactaggaaatcaagaaatggccgaaaagcttcaaagaggaaa
tcttccacatcaaagtcttttaggcctcaaagagctgctgcacgaaatgcacttaattta
ttttcgaaaatcacaggtacatcgacagatggtgaaggtgaagatggctctgaaaatttt
tcagaaagtgaatccacattgcaagattcaatcgttgagagtgatgaatccgataggcct
ttggaaaatgaggaaacaaagcatttaaaaggtaaagaagtgtcactgggtgagtctaag
gatgttgaacattctgaactacccgaatcttgtattgacagtggaaatcggaaaagattg
gtcctcaaattgccgattcgggattcaaataagcttcttctttcagggagaacattgcat
aaaagtaactaccaggctgatttgatgggttcatcatctaaagctccacaggagaccatt
gaagaaagcagcaatcataaaaactctcgggatctaggatactgttctggtgatgtaaac
ggcagcatcattgaaagaaaagggagaaagagattagataaggttgaagatcatttaaat
ctgtctgaaagttacaataataggcaaattaaatggggaggggcaaaggctcgcacatcc
aggcaccttagatttggggaagggatgtcatcaggagctaatgtcagatctcatgcaagt
ctggttggtcatgacgaaaaagagaataatgttgaaggacatgtaaagtctcgaaaggac
tgtgatgcaatatccccttgtttagaaattctaaattatggggataatatggacgggttg
ccactaacagaggaaacaaatattgttgctactacctctgagggttttaatggtgagtca
ccaaagtctgttcacatggttgctcaggatagcaccacatcattgcagtacaaggatggg
aacgatcagcatcatgaacaaaatgagacaatgaggattaggtcaagaagaatttcaaca
gatcctgaaagtcctaagcaggaaaggacattttcagtagaaaatcaggacaatagttgg
catgcaagcccttcagacaaagaacaagatccagttgtgcctactgatgaaaccatcaga
ataaatacagatcatggagatgaaacacaagaattggacactcaaatgaataataattct
gtatcaatcgtgcaggattcacaggtgttgcattcaaatagaaacaaaatgtatacagct
gtttacaaaaggtcgaaatcaaacaggagtagggctaatttagaaattgatagcggtggc
atgggagaaagcaattcacatgtgagcaaccagagtctaactgttggactggactctcaa
ggttctattgatggggctcgtaggacaaggtccatgggaccgaaggcatctacacgtgat
tcagatattgtcattgatagtctcaagtcacaacaaggacacgaatcaggccattttagg
agtacccgtaatagttccacagacagatgtcaactcccttctgaaaaatggggatcgagt
tctagaatgactgttggtttgaggtctactagaaacaggaggagcagtaattatgcctgt
gaggggagtccactagatagaaggaagtctcatcagtcagctagaaaaggatcttggtta
ttgttgtcaaaacatgaagagggctcccgatatattccccagcaaggggatgaagttgta
tatttgagacagggccatcaggagtatattaattattttaattcaaaagaattgggccat
tggagaacaatgatgggaagccttgacttatcaaaagaaatgatgggaaacataagagct
gtggagttttgtagagttgaaagccttgagtattcctcacttgccgggtctggggatagc
tgctgtaaaatgactctccaatttgtagatccaacttccagtctgtgccatatatctttt
aaattgactctgccagaagtgactggcttcccagatttccttgttgaaagaactcggttt
gatgctgctatgcagaaaagatggtcatttagggataaatgcagagtttggtggaaaaat
gaaggcgaagaagatggtagtttgtgggatggtcggattgtgtctgtgaaggccaaatcg
gaagaatttcccgacagtccatgggagaggtacaccgttcaatacaaaagtgatcccaga
gaaaggcataatcatagtccttgggagctttatgatgctgatactcaatgggagcagcct
catattgatgatgagatcagaaataagctgctgtctgcttttgccaagttagagcagtcg
ggaaacaaacccgaggatcgttatggggttcaaaaattgaaaaatgttgcagataaatca
tattttactaacaggtttcctgttccattgtcacttgaagtgatccaggcaagattggag
aacaattattaccgaagtttagaggcattgaatcatgacatatccgtcatgtcgtcaaat
gccaaaatatactttggaaaaaatgcagaaatgtcagacaaaatagatcgcctatcagat
tggttcatgcggacattatcatctttgtag
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integrated database retrieval system
