KEGG   Juglans regia (English walnut): 108984163
Entry
108984163         CDS       T05245                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
jre  Juglans regia (English walnut)
Pathway
jre03020  RNA polymerase
jre03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108984163
  09124 Replication and repair
   03420 Nucleotide excision repair
    108984163
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:jre03021]
    108984163
   03400 DNA repair and recombination proteins [BR:jre03400]
    108984163
Transcription machinery [BR:jre03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     108984163
DNA repair and recombination proteins [BR:jre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      108984163
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Cas12f1-like_TNB Zn_ribbon_recom Zn_ribbon_4
Other DBs
NCBI-GeneID: 108984163
NCBI-ProteinID: XP_018811568
UniProt: A0A834CUN1 A0A2I4DWP4
LinkDB
Position
7:16247374..16249322
AA seq 112 aa
MSTMKFCRECNNILYPKEDKDQKILLYACRNCDHQEVADNNCVYRNEIHHAVGERTQVLQ
DVAADPTLPRTKSVRCTQCNHGEAVFFQATARGEEGMTLFFVCCNCGHRWRD
NT seq 339 nt   +upstreamnt  +downstreamnt
atgagtaccatgaaattttgccgcgaatgcaacaatattctataccctaaggaagataag
gaccagaagatcctcctctacgcgtgccgcaactgcgatcaccaggaggttgctgataac
aactgtgtctatagaaacgagatacaccatgctgttggagagcgcactcaagtgttacag
gatgtggctgcagatccaactcttcctcgcactaaatctgttcgctgtactcaatgcaac
catggagaagctgtcttcttccaggccactgctagaggggaggagggtatgacgctgttt
tttgtgtgctgtaactgtggccatcgatggagagattaa

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