Juglans regia (English walnut): 108984181
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Entry
108984181 CDS
T05245
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108984181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jre04121
]
108984181
03036 Chromosome and associated proteins [BR:
jre03036
]
108984181
Enzymes [BR:
jre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108984181
Ubiquitin system [BR:
jre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108984181
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
108984181
Noncanonical PRC1 (PRC1.1)
108984181
Noncanonical PRC1 (PRC1.3/1.5)
108984181
Noncanonical PRC1 (PRC1.6)
108984181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
zf-rbx1
zf-RING_6
zf-UDP
zf-Nse
zf-RING_10
zf-C3HC4_5
ZNF512_C2HC
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
108984181
NCBI-ProteinID:
XP_018811597
UniProt:
A0A2I4DWS1
A0A833Y0S2
LinkDB
All DBs
Position
3:5690162..5697299
Genome browser
AA seq
449 aa
AA seq
DB search
MPAQKRALGVAEDDPVQDNPSNHHEPSEDAEESDRSPSSSNGDNKDEFVAVKLSDIRKEV
QCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDAL
IAALHPDIDKYEEEESAFHEEEMARNKQIQASIAHTFRRQAEALGKKRSTAKATAAAFVR
RSRGYRNAHLRGRRNYRNAAESQGSDENEDANGNDGGKDSSSADELTEVRPKRSKRWLGA
RFSQPSLAAAGADGGGDENDSEVNKESMGATAGLVSGSERLSWGKGGMRSHTRYGSMSGG
NGRNARNSRPSKLADYLRNIEKNDDELTINLMLVPLDEQIIPSLERPYLCCRPTLSVRQL
CQYVAMRTTTQHEVELHLVKELHSKINLSTPASSPPGKSLIIDPGKDELRILGEGETLEG
LATNDLIHGYLLLAYKRKSWNSNLVMALS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgcagaagcgagctctcggtgtggcggaggatgatcctgtgcaagacaacccc
agcaaccaccatgaaccctcagaggacgcagaggaatctgatcgaagcccttcgtcgagt
aacggggacaacaaggacgagtttgttgcagtgaagctgtcagatattcgtaaggaagta
caatgtccaatctgtctagggatcattcggaaaactaggacggtgatggaatgcctgcat
cgcttctgcagggaatgcattgacaaatctatgaggctggggaacaatgaatgccctgcc
tgccggacccattgcgccagtcgtcgttccttgagagatgatccaaactatgatgcttta
attgcagctttgcatccagatattgacaagtatgaggaagaggaatcggctttccatgaa
gaggaaatggctcgcaataagcagatacaagcttccatagcccacacttttcgacggcaa
gcagaagctttgggtaagaagcggtcaacagctaaagccacagcagctgcatttgttagg
agatcacggggctatcgaaatgctcatctgagaggaaggagaaactatcgaaatgctgct
gagagtcaaggatccgatgagaatgaggatgcaaatggtaatgatggaggcaaagattca
tcttcagctgatgagctcacagaagtcagaccaaaaagaagcaaaagatggttaggagct
cgattttctcagccttctctggcagctgcaggagctgacggaggtggtgatgaaaatgat
tctgaagtgaataaagaatctatgggtgcaactgctggacttgttagcggctcagaaagg
ctttcctggggcaaaggtggcatgcggagtcacacacgatatggcagtatgagtggtgga
aatggtagaaatgcacggaacagtcgcccctcaaaactggctgattatctgcgtaacata
gagaaaaatgatgatgagttgactatcaacctcatgcttgttcctttggatgaacaaatt
ataccgagtttggagaggccctacctttgctgcaggcctaccctgtcagttagacagctg
tgccagtatgtagccatgcgaactacaacccaacatgaagttgaattgcacttggtaaaa
gaattgcattccaaaatcaacctttcaacccctgcaagttctccaccgggcaagtccctt
ataattgatccaggcaaagacgagttgcgaatcctaggggagggggaaactctagaaggg
cttgcgacaaacgacctcattcatggctatttgcttctggcatacaagagaaagtcatgg
aactcaaatcttgtgatggctttatcatga
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