Juglans regia (English walnut): 108984271
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Entry
108984271 CDS
T05245
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
jre
Juglans regia (English walnut)
Pathway
jre04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108984271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
jre04131
]
108984271
Membrane trafficking [BR:
jre04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108984271
Hops complex
108984271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
Clathrin
zf-C3H2C3
TPR_Vps41
WD40_CDC20-Fz
Beta-prop_EML
zf-C3HC4_2
zf_RING_Vps8_fungal
zf-RING_5
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
108984271
NCBI-ProteinID:
XP_018811711
UniProt:
A0A2I4DX32
LinkDB
All DBs
Position
11:complement(410190..416535)
Genome browser
AA seq
957 aa
AA seq
DB search
MYQWRKFDFFEEKNPGKSNRVPEEVSARIGCCSSGRGKVVIGCNDGTVSLLDRGLNFNYA
FQAHSSSVLFLQQLKQRNFLVSVGKDEQISPQQSAICLKVFDLDKMQPEGSSTTIPDCIG
ILRIFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIGRERISRFKLQVDNL
SDKSQSSITGLGFRVDGQALQLFAVTPASVSLFSLQDQPPRRQTLDHIGSNVNSVTMSDR
SELIIGRPEAVYFYEIDGRGPCWAFEGEKKFLGWFRGYLLCVIADQRNGKNTFNVYDLKN
RLIAHSIVVKEVTHMLCEWGNIILIMSDKSALCIGEKDMESKLDMLFKKNLYTVAINLVQ
SQQADAAATAEVLRKYGDHLYIKQDYDEAMAQYIHTIGHLEPSYVIQKFLDAQRIYNLTN
YLEKLHEKGLASKDHTTLLLNCYTKLKDVEKLNIFIKSEDGVGEHKFDVETAIRVCRAAN
YHEHAMYVAKKAGRHELYLKILLEDLGRYDEALQYISSLEPSQAGMTVKEYGKILIKHKP
VETIEILMRLCTEDKESVNQGASSDAYLSMLPSPVDFLNIFIHHPQSLMDFLERYTNKVK
DSPAQVEIHNTLLELYLSNDMNFPSTLQANYIEGLNLGGTGMSRAESNGKYVADCKDSDK
EKDRPERRDKGLCLLKSAWPSELEHPLYDVDLAIILCEMNVFNEGLLYLYEKMKLYKEVI
ACYMQAHDHEGLIGCCKRLGDSGKGGDPSLWADLLKYFGELGEDCSKEVKEVLTYIERDD
ILPPIIVLQMLSRNPCLTLSVIKDYIARKLEQESKLIEEDRRAIEKYQEDTSAMRKEVQD
LRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHQRCLGDNEKECPECAPEYRSVLETKR
SLEQNSKDQEQFFQQVKSSKDGFSVIAEYFGKGIISKTTNGPISAPRSGSISSSSGL
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagtggaggaaattcgacttcttcgaggagaaaaaccctggcaaatccaatagg
gtgccggaggaggtgagcgctagaatcggttgctgctcaagcggccgaggcaaggtggtc
atcggttgcaatgacggcaccgtcagcctcctcgatcgcggcctcaatttcaattacgcc
ttccaggctcactcttcctccgtcctatttctccagcagctcaagcaacgcaactttctg
gtatctgttggaaaagatgaacaaatatccccgcagcagtcagctatctgccttaaagtt
tttgatctcgacaagatgcagccggagggatcaagcaccacgatccctgattgtattggt
atattgcgaatattcactagtcagttccctgaggcaaagattacatcatttttagtacta
gaggaagcaccgcccatactactgatagctattggcttagataatggttgcatttactgc
atcaaaggggatattggacgggagcgtatctcccgtttcaagcttcaggttgataacctc
tcagacaaaagccagtcttctataactggtctaggtttcagagtggatggtcaagccctt
caactgtttgctgttactccagcttcagttagcttgtttagtctgcaggaccaaccaccg
agacggcaaactctagatcatattggatccaatgtcaacagtgttacaatgagtgaccgc
tcggagttgataattggtcgacctgaggccgtgtatttttatgaaattgatggacgtggt
ccgtgctgggcttttgaaggagagaagaaatttctgggatggtttcgtggatacctttta
tgcgttattgcagaccaaagaaatggcaagaatactttcaatgtttatgacctgaagaac
cgtctgattgcccatagtatagtggttaaagaagttactcacatgctttgtgaatggggt
aacataatccttataatgtctgacaaatcagctttgtgtattggggagaaagatatggaa
agcaagttagatatgctgtttaaaaaaaacctatatacagtagccataaatcttgttcaa
agtcaacaggctgatgctgccgcaactgcagaggtgctaagaaagtatggggaccattta
tatattaaacaagactatgatgaggctatggcccagtatatccacactattggtcatctt
gaaccttcgtatgtcatacagaagtttttagatgcacaaagaatctacaaccttaccaac
tacttggagaaattacatgagaaggggcttgcttctaaagatcacacaactcttctcttg
aattgttacacaaaattgaaagatgtggaaaagctaaatatatttattaaaagtgaggat
ggtgttggggaacataagtttgatgtggaaactgcaataagggtttgccgtgctgccaat
tatcatgagcatgcaatgtatgtcgctaagaaggcagggaggcatgaattgtacttaaaa
atcttactcgaagatcttggtagatatgacgaagccttgcaatatatttcaagccttgaa
ccaagtcaagcagggatgacggtgaaggagtatggtaagattcttataaagcacaagcca
gtggagacaattgagatactcatgaggctttgcacagaggataaagaatcagttaaccaa
ggagcctcaagtgatgcatacttatctatgttgccatctcctgttgattttctcaacatt
ttcatccaccacccgcagtccctaatggattttcttgaaagatataccaataaggtgaaa
gactcacctgctcaagttgaaatccacaacacactcttggagttgtacttgtccaatgac
atgaactttccatcaaccttacaagcaaactatattgagggtcttaatcttggaggaact
gggatgtcaagagctgagtccaatgggaaatatgtcgctgattgcaaagactcagacaag
gaaaaggaccgtccggaaaggcgggacaaggggctatgcttgcttaaaagtgcttggcca
tctgagcttgaacatccgctatatgatgttgatttagctattattctatgtgaaatgaat
gtattcaatgaagggctgctgtatttatatgaaaagatgaaactctataaagaggtgatt
gcttgctatatgcaggcacatgatcacgaaggattgattggttgctgcaaaagacttggg
gattcaggtaaaggaggggacccttctctttgggcagatctgctgaagtattttggtgaa
cttggagaagattgctccaaagaagtgaaggaagttttgacctatatcgaaagggatgac
atcttgcctccaattattgttcttcaaatgctgtccagaaatccatgcctcacactctct
gtcatcaaggattatattgctcgaaagcttgaacaggaatcaaagctgatcgaagaggac
cggcgagctattgagaagtatcaggaagacacgtcggcaatgagaaaagaagttcaagat
ctcaggacaaatgccagaatatttcagcttagcaagtgtactgcttgcactttcacactt
gatctccctgctgtacactttatgtgtatgcactcattccaccagcgctgccttggtgat
aatgaaaaagaatgtcctgaatgtgctcctgaatataggtctgtcctggaaacgaagaga
agcttggagcagaattctaaagaccaggagcaattcttccagcaagtgaagagttcaaag
gatgggttttcggtgattgctgagtactttggaaaaggaatcataagcaaaacgactaat
ggacccatcagtgctcctagatcaggcagcatttcttccagcagtggcctctga
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