KEGG   Juglans regia (English walnut): 108984440
Entry
108984440         CDS       T05245                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
jre  Juglans regia (English walnut)
Pathway
jre03030  DNA replication
jre03410  Base excision repair
jre03420  Nucleotide excision repair
jre03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108984440
   03410 Base excision repair
    108984440
   03420 Nucleotide excision repair
    108984440
   03430 Mismatch repair
    108984440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:jre03032]
    108984440
   03036 Chromosome and associated proteins [BR:jre03036]
    108984440
   03400 DNA repair and recombination proteins [BR:jre03400]
    108984440
DNA replication proteins [BR:jre03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    108984440
  DNA Replication Termination Factors
   ELG1-RFC complex
    108984440
Chromosome and associated proteins [BR:jre03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    108984440
DNA repair and recombination proteins [BR:jre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     108984440
  Check point factors
   HRAD17(Rad24)-RFC complex
    108984440
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 Rad17 AAA_16 Mg_chelatase Viral_helicase1 RCF1-5-like_lid nSTAND3 AAA_11 AAA_5 RuvB_N AAA_28 AAA_assoc_2 AAA_19 AAA_24 DNAX_ATPase_lid AAA_30 MeaB AAA_25 ABC_tran KTI12 RNA_helicase bpMoxR AAA_3 AAA_18 AAA_7 NTPase_1 IstB_IS21 NPHP3_N T2SSE SLFN-g3_helicase DO-GTPase1 AAA_29
Other DBs
NCBI-GeneID: 108984440
NCBI-ProteinID: XP_018811956
UniProt: A0A2I4DXS7 A0A833XVQ5
LinkDB
Position
2:complement(31473380..31477335)
AA seq 334 aa
MAASSSSGNTGSGYDMPWVEKYRPNKVVDIVGNEDAVYRLQVIARDGNMPNLILSGPPGT
GKTTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVIL
DEADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILG
RLMVVVEAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHP
LHVKNMVRNVLEGKFDDACYGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKET
GFAHMRICDGVGSYLQLCGLLAKFSVVRETAKAA
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggctgcctcgtcttcgtctggcaacaccggcagtggatacgacatgccgtgggtcgag
aagtaccgacccaacaaggtcgtcgacatcgtgggcaatgaggacgccgtgtacaggctc
caagtcatcgctcgcgatggcaacatgcccaacctcatcttatccggtcctcctggaact
ggtaaaaccactagcatactggcgcttgcgcatgagcttttgggtccaaactataaggag
gctgttttggagctaaatgcatcagatgacaggggaattgatgtggtgaggaacaagatt
aagatgtttgctcaaaagaaagtaacactgccccctgggcgccacaagatagtaatcttg
gatgaagctgacagcatgacatctggagcacagcaagctttgaggaggacaatggaaata
tattcaaactccactcgttttgctcttgcatgcaatacatcttctaaaattatcgagcct
atacaaagtagatgtgctcttgttcgattttcgagactatctgaccaagagatactcggc
cgtctcatggtggttgttgaagctgaaaaggttccctatgttccggaaggtctcgaagcc
ataatttttactgctgatggtgacatgaggcaggcattgaataacttgcaagctacatac
agtgggtttcgttttgtcaaccaagaaaatgttttcaaggtttgtgatcagcctcatcca
ttgcatgtgaagaacatggtgcgtaatgtactagaagggaaatttgatgatgcttgttat
ggtctcaagcagctctatgatttgggctattcacctaccgacataatcacgacactattc
cgaataattaaaaactacgatatggctgagtatctgaaattggaattcatgaaggagact
ggatttgcccatatgcgaatctgtgatggagttggttcatatcttcagctctgtgggctt
ctggccaagttttccgtggtccgcgaaacagctaaagcagcatag

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