Juglans regia (English walnut): 108984575
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Entry
108984575 CDS
T05245
Name
(RefSeq) vacuolar sorting protein 18 isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
jre
Juglans regia (English walnut)
Pathway
jre04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108984575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
jre04131
]
108984575
Membrane trafficking [BR:
jre04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108984575
Hops complex
108984575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_11
zf_RING_Vps8
zf-RING_Vps41
zf-rbx1
zf_RING_Vps8_fungal
RPN1_RPN2_N
zf-RING_UBOX
Nup54_57_C
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
108984575
NCBI-ProteinID:
XP_018812127
UniProt:
A0A2I4DYA6
LinkDB
All DBs
Position
1:20113694..20128907
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AA seq
987 aa
AA seq
DB search
MDSGRQVFMVDLLERYAAKGRGVITCMAAGNDVIVLGTSKGWVIRHDFGVGDSSEIDLSV
GRPGEQSIHRVFVDPGGSHCLAVIVGSGGADTFYTHAKWTKPRVLSKLKGLVVNAVAWNR
QQITEASTKEVILGTDNGQLHEIAVDEKDKKEKYIKFLFELSELPEDFMGLQMETASVLS
GTRYYVMAVTPTRLYSFTGTGSLEALFASYLDRAVHFMELPGEVPHSELHFFIKQRRAIH
FAWLSGAGIYNGGLNFGSQNSSPNGDENFVENKALLDYSKLSESAEVVKPSSMAVSEFHF
LLLIGNRVKVVNRISEQIIEELQFDQASESVSRGIIGLCSDATAGLFYAYDQNSIFQVSV
NDEGRDMWKVYLDMKEYAAALANCRDALQRDQVYLVQAEAAFASKDYLRAASFFAKINYI
LSFEEITLKFISISEQDALRTFLLRKLDSLAKDDKCQITMISTWATELYLDKINRLLLED
DTAVDNRSSEYQSIIKEFRAFLGDCKDVLDEATTMRLLESYGRVEELVYFASLREQYEIV
VHYYIQQGEAKKALEVLQKPAVPIDLQYKFAPDLIMLDAYETVESWMATNNLNPRKLIPA
MMRYSSEPHAKNETHEVIKYLEFCVHRLHNEDPGVHNLLLSLYAKQEDDSTLLRFLQCKF
GKGQENGPEFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQVDPELAMAEAD
KVEDDEDLRKKLWLMVAKHVIEQEKGAKRENIRKAIAFLKETDGLLKIEDILPFFPDFAL
IDDFKEAICSSLEDYNKQIELLKEEMNDATHGADNIRNDINALAQRYAVIDRDGECGVCR
RKILTVGREYQMAQGYSSIGPLAPFYVFPCGHAFHAQCLIAHVTRCTNEAQAESILDLQK
QLTLLGGEARKDSNGSVTEDSITSMAPADKLRSQLDDAIASECPFCGDLMIREISLPFIL
PEEAQQVMSWEVKPHNLGNQRSLSLPV
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggattcagggagacaggtatttatggtggatcttctagagaggtacgcggcgaaaggt
cgcggtgttatcacctgcatggccgccgggaacgacgtcattgtattgggcaccagcaaa
ggctgggtcattcgccacgatttcggtgtcggcgactcgtccgagattgatctttctgtg
ggtcgtcctggggagcaatcgatccatagggtttttgttgatccgggagggagccattgt
cttgcagtcattgttgggagtggaggtgctgatactttttacactcacgcaaagtggacc
aagccccgggttttaagcaaattgaaaggtctcgtggtgaatgccgttgcctggaataga
caacagattacagaagcttctacaaaggaagtcattcttggtacagacaacggccaacta
catgagattgctgtggatgagaaggacaagaaggagaagtatatcaaatttctatttgaa
ttgagcgaacttccagaagatttcatgggtttgcagatggaaacagctagcgtactcagt
ggaactagatactatgtgatggctgttactcccacacgactttactctttcactggaact
ggatcactggaggctctttttgcaagttatttagatcgtgctgtgcatttcatggaactt
cctggtgaagtaccccacagtgaacttcatttcttcatcaagcaaagaagagccatacat
tttgcatggctttctggagctggtatctataatggtggcttaaatttcggatcgcagaat
agttcaccaaatggagatgaaaactttgtggagaacaaagctctattggactattcaaaa
ttgtctgaaagtgctgaagttgttaaacccagttcaatggcagtgtctgaatttcatttc
ttgcttcttattgggaatagggtcaaggttgtaaatagaattagcgagcaaatcatagag
gaacttcagtttgatcaggcatcagagtccgtttcaaggggaatcattggattatgtagt
gatgccactgctggattgttctacgcatatgaccagaactctatatttcaggtgtctgtc
aatgatgaaggtcgagatatgtggaaggtttacctggacatgaaagagtatgctgcagct
ttggcaaattgtcgtgacgccctccagagggaccaagtatatttagtacaggctgaagct
gcatttgcttccaaggattatctcagagcagcatctttctttgcaaaaattaactatata
ttatcattcgaggagatcactctaaagtttattagcataagcgaacaggatgctttgaga
actttcttactgaggaagcttgatagtcttgcaaaggatgataaatgccaaataactatg
atctccacttgggctactgaattgtacttggacaagataaaccgattactcttggaagat
gacactgctgtcgataatcgtagttcagagtaccaatcgatcattaaagagtttcgagct
tttcttggtgactgcaaggatgtattggatgaagcaactacaatgagacttttggaaagt
tatggtcgggttgaagaattagtatattttgctagtctgagggagcagtatgaaattgtt
gttcactactatattcagcaaggagaagcaaagaaagcattggaagtgctccaaaaacct
gctgttcctatagaccttcagtacaagtttgccccagacctcatcatgcttgatgcatat
gaaactgtggagtcatggatggccacaaacaacctgaatccgaggaaactgattcctgca
atgatgcgttattcaagtgagcctcatgccaagaatgaaacacatgaagttatcaaatat
ttggaattctgtgttcatcgtttgcataatgaggatcctggagttcacaacttgctgctc
tctctttatgccaagcaggaagatgatagcacacttctgcgtttcctgcaatgcaagttt
ggaaaaggacaggaaaatggccctgagttcttctatgatcccaagtatgccttgcgccta
tgcctcaaggaaaagcgaatgcgtgcctgtgtacatatatacagtatgatgtctatgcat
gaagaagcagttgctcttgccctacaggttgaccctgagctcgcaatggctgaagcagac
aaggttgaagatgacgaagacttgagaaaaaagctctggctcatggttgccaagcatgtt
attgaacaggaaaagggagctaaaagggagaacatacgaaaggctatagcatttctaaag
gaaacggatggccttttaaagattgaggatatattaccattctttccagactttgctctg
attgatgacttcaaagaggcaatttgctcatcacttgaggattacaacaagcaaattgaa
ctacttaaagaggagatgaacgatgcaacacatggtgcagacaacatcagaaatgatata
aatgcacttgcccaaagatatgctgtgattgatcgtgatggggagtgtggggtttgtagg
cgtaaaattttaactgtgggtagagagtaccagatggctcagggttactcatcaatagga
ccactagcccctttctatgtctttccatgcggacatgccttccatgcacaatgcctgatt
gcccatgtcacacgttgtaccaacgaagctcaagcagagtctatactggacctgcagaag
caacttactttactgggtggggaagcaaggaaggattcaaatggaagcgtaactgaggat
tccataactagcatggcccctgcagataagctccgatcacagctggatgacgccatagcc
agcgaatgcccattttgtggtgacttgatgatccgtgagatctccttgccttttatcctg
ccggaagaagcacagcaggttatgtcatgggaagtaaaaccacataatcttggaaaccag
aggagcctttctttacctgtatga
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