Juglans regia (English walnut): 108984584
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Entry
108984584 CDS
T05245
Name
(RefSeq) rhamnogalacturonate lyase-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
108984584
Enzymes [BR:
jre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
108984584
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
108984584
NCBI-ProteinID:
XP_018812136
UniProt:
A0A2I4DYA8
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Position
11:5424336..5430212
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AA seq
633 aa
AA seq
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MDRIIYDQVVVDNGIVGVSFSRPDGHVLGINYNNGLDNLLEEHNGRDDRGYWDVVWNDQQ
GGRGTTGIFERVAGTNFTVITQNADQVELSFSRTWDVSKRGESVPLNIDKRYILRRGNSG
FYSYAIFERVKGWPEVEITQIRIVYKLQEEIFHYMAVSDDMQRCMPTYQDRENGQVLAYP
EAVQLTNPVEPKFRGQVDDKYQYSVENKDNKVHGWISSSPSVGLWVITPSNEFRTAGPMK
QDLTSHVGPFALSMFVSTHYAGKDVEMKFEEGEPWKKVFGPIFLYVNSLSNEENASKLWK
NAKEQMSVEEESWPYNFTKTEDFPFADQRGTVTGQLMVHDPYMNEKLMGGQSAYVGLAAP
GEVGSWQRESKGYQFWTKADEQGRFVIKNVRPGDYNLYAWVPGFVGDYKNNSTISIKPGS
EINLNVLVYEPPRKGPTLWEIGIPDRTAGEFYIPDPNPALRDPLYNINSNTEKYRQYGLW
DRYTDLYPDQDLIYNINTSNYCTDWFFAHVTRRVNGWTYEGTIWQIVFELRTVEDNSNYT
LQMALASAEAATLQVRFNNPMARFAHFSTGFIGGDNAIARHGVHGLYWLYTIDVPSDLLK
VGENTIYLIQSKSGSPFQGVMYDYLRLEGPPQD
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggatcgaattatatatgatcaggtggtggtggataatggcatcgtgggagtgagtttc
tcgagaccagatggtcatgtcttgggaataaactataacaatggtctcgataatttgctt
gaagaacataatggcagagatgatagagggtattgggatgtagtttggaatgatcagcaa
ggtggtcgtggtactactggaatctttgagagagtggcaggaacaaactttacggtaata
actcagaacgcagaccaagtagagctttcatttagcaggacatgggatgtttccaaacgt
ggagagagtgttcctctaaatatagacaagagatacatattgcgacgtggaaactcggga
ttttattcatacgcaatatttgagcgtgttaagggatggccggaggtggagattacacag
attaggattgtttacaagctccaagaagaaatatttcattacatggcagtatctgacgac
atgcagaggtgtatgccgacgtatcaagatcgagaaaacggtcaggtcctagcttacccg
gaggctgttcagttgaccaacccagttgaacctaaatttcgaggacaggtagatgacaag
taccaatactcggtggaaaacaaagacaataaggttcatggatggatatcttcaagcccg
tctgttggattatgggtcataacaccgagtaatgagttcaggacagcagggcccatgaag
caggacctcacctcccatgtgggcccctttgccctctctatgtttgtgagtacacactac
gctgggaaggacgtagagatgaagtttgaagaaggggagccatggaagaaagtttttggt
cccatatttctttatgtcaattcgctctctaacgaggaaaatgcctcaaaactttggaaa
aatgccaaagagcagatgtcggttgaagaagaaagttggccatacaatttcacaaagaca
gaagactttccttttgctgaccaacgtggaaccgttacgggtcaattgatggtccatgac
ccgtatatgaatgagaaattaatgggtgggcaatctgcttacgtgggattggcggctccg
ggagaggtgggatcatggcaaagggaaagcaagggctatcaattctggaccaaagcagac
gagcaaggacgtttcgtcattaaaaatgtccgacctggagactataatttgtatgcgtgg
gtccctggttttgttggggattacaaaaataactccactatttctattaaaccaggttcg
gaaataaatctgaatgttcttgtgtatgagcctccaagaaagggtccgaccctgtgggaa
attggcatccctgaccgcacggccggagagttctatatacctgatccaaacccagcactc
agggacccattgtataacattaattctaacacagaaaagtaccgacaatatggtttatgg
gatcggtacacagatttatatccagatcaggatctcatctacaacatcaataccagcaac
tattgtactgattggttcttcgcccacgttacgaggcgtgtaaatggttggacatatgaa
ggtacaatatggcagattgtatttgaattgcgaacagtggaagacaacagcaactacacc
ctccagatggccttggcgtcagctgaagcagctaccttgcaggttcggttcaacaatccg
atggccagatttgctcacttcagcacaggatttataggaggcgacaatgccatcgcgagg
catggagttcatgggttatattggttgtacaccattgatgtaccaagcgatctactcaaa
gtaggagaaaacacaatctatctcatacagtcaaagagcggaagtccttttcaaggagta
atgtatgattaccttcgactcgaagggcctcctcaagactga
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