Juglans regia (English walnut): 108984682
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Entry
108984682 CDS
T05245
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
jre
Juglans regia (English walnut)
Pathway
jre03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108984682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
108984682
03036 Chromosome and associated proteins [BR:
jre03036
]
108984682
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108984682
Coactivators
SAGA/TFTC/STAGA complex
108984682
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
108984682
STAGA complex
108984682
TFTC complex
108984682
SAGA complex
108984682
SLIK complex
108984682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
108984682
NCBI-ProteinID:
XP_035542972
UniProt:
A0A6P9EJQ2
LinkDB
All DBs
Position
2:36601208..36607484
Genome browser
AA seq
537 aa
AA seq
DB search
MSVVPKEAIEVVAQSIGITNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTSLTADD
VDSALKLRNVEPIYGFTPGDPLRFKRAVGHKDLFYIDDKDVEFKDVIEAPLPKAPLDTSV
TSHWLAIEGVQPAIPENAPVEALAATSDGKKSEYTEDRLPIDIKLPVKHVLSRELQLYFE
KVTELTVNKSGSVLFKQALLSLATDAGLHPLLPYFTYFIADEVTRNLNNYSVLFALMRVV
RSLLQNPHIHIEPYLHQLMPSVITCLVAKRLGNRSSDNHWELRDFTANLVASICQRFGHV
YHNLQPRVTRTLLHAFLDPTKALSQHFGAIQGLAALGPSVVRMLILPNLEPYLQLLVPEM
LLEKQKNEMKRREAWRVYGALLCAAGQCMYDRLKMFRTLLSPPTRAVWKINGKVVTTMRN
KRKASTDNLMQQQPLKKIATESTMGVVPMNSMQGTTVGYSTAVGGSSTGLSSMSRQLPAE
NISGRGEIGGRAVKVSTVLSQAWKEDMDAGHMLGSLFEFFGESLFSFTPKPELAFFL
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgtcccaaaggaggcaattgaggtcgttgcacagagcattggaattaccaat
ttgtcccccgatgttgccctcgctctcgctcccgacgtcgagtaccgcgttcgagagatc
atgcaggaggcgattaaatgcatgcgccactcaaagcggactagtctgacggctgatgat
gtggatagtgcacttaagttaagaaatgtggagccaatatatggctttacacctggagat
cccctgaggttcaaaagggctgttggacacaaggatttattctatattgatgacaaggat
gtggaatttaaagatgttattgaggcgcctttaccaaaagcaccacttgatacgtcagtt
acctctcactggctggcaattgaaggtgttcaacctgcaattccagaaaatgctccagtt
gaagcacttgcggcaacttctgatggaaaaaaatctgagtacacagaagatagacttccc
attgacattaaattacctgttaagcatgttctatcaagggagcttcagctgtactttgaa
aaagtcacagaactaactgtgaataagtctggctctgtcctcttcaaacaagcattgttg
agcttggcaacagatgcaggactgcatcctttactcccgtacttcacatacttcattgct
gatgaggttacacgtaatttgaacaattattctgtcctgtttgctttgatgcgtgttgtt
cgaagccttcttcaaaatccacacattcatatagaaccttatctacaccaattgatgcca
tctgttattacatgccttgttgcgaaaagattagggaatagatcttctgacaatcattgg
gagcttagggactttacagcaaacctggttgcttcaatatgccaaagatttgggcacgtt
tatcacaaccttcagccacgtgtcacaaggactctgctccatgctttcttggacccaacc
aaagcattgtctcaacactttggtgcaattcaagggctagcagcccttggacccagcgtg
gttcgtatgcttatattaccaaatcttgagccatatttgcaacttctggttccagaaatg
ctgcttgagaagcaaaagaatgagatgaagaggcgcgaagcttggcgtgtttatggtgcc
ttgctgtgtgcagctggccaatgcatgtacgatcggctcaagatgtttcgcactctgctt
tcaccaccaactcgtgcagtctggaagatcaatggaaaagttgtgactacaatgcgaaat
aaacgcaaggccagcacggacaacttaatgcagcaacaaccactcaagaaaatagcaact
gagagcacaatgggtgtggtaccaatgaactccatgcaagggacaacagttgggtattcc
actgctgtaggaggttccagcactggtttgtcatcaatgtctcggcagttaccagctgaa
aacatttctggaaggggggagattggtggtagggcggtaaaagtttctaccgttctttct
caggcttggaaggaggacatggatgcaggacatatgttggggtctttgtttgaatttttt
ggtgaaagtctgttttcttttaccccaaaacccgagcttgccttcttcttgtga
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