Juglans regia (English walnut): 108984682
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Entry
108984682 CDS
T05245
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
jre
Juglans regia (English walnut)
Pathway
jre03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108984682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
108984682
03036 Chromosome and associated proteins [BR:
jre03036
]
108984682
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108984682
Coactivators
SAGA/TFTC/STAGA complex
108984682
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
108984682
STAGA complex
108984682
TFTC complex
108984682
SAGA complex
108984682
SLIK complex
108984682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
108984682
NCBI-ProteinID:
XP_035542972
UniProt:
A0A6P9EJQ2
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All DBs
Position
2:36601208..36607484
Genome browser
AA seq
537 aa
AA seq
DB search
MSVVPKEAIEVVAQSIGITNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTSLTADD
VDSALKLRNVEPIYGFTPGDPLRFKRAVGHKDLFYIDDKDVEFKDVIEAPLPKAPLDTSV
TSHWLAIEGVQPAIPENAPVEALAATSDGKKSEYTEDRLPIDIKLPVKHVLSRELQLYFE
KVTELTVNKSGSVLFKQALLSLATDAGLHPLLPYFTYFIADEVTRNLNNYSVLFALMRVV
RSLLQNPHIHIEPYLHQLMPSVITCLVAKRLGNRSSDNHWELRDFTANLVASICQRFGHV
YHNLQPRVTRTLLHAFLDPTKALSQHFGAIQGLAALGPSVVRMLILPNLEPYLQLLVPEM
LLEKQKNEMKRREAWRVYGALLCAAGQCMYDRLKMFRTLLSPPTRAVWKINGKVVTTMRN
KRKASTDNLMQQQPLKKIATESTMGVVPMNSMQGTTVGYSTAVGGSSTGLSSMSRQLPAE
NISGRGEIGGRAVKVSTVLSQAWKEDMDAGHMLGSLFEFFGESLFSFTPKPELAFFL
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgtcccaaaggaggcaattgaggtcgttgcacagagcattggaattaccaat
ttgtcccccgatgttgccctcgctctcgctcccgacgtcgagtaccgcgttcgagagatc
atgcaggaggcgattaaatgcatgcgccactcaaagcggactagtctgacggctgatgat
gtggatagtgcacttaagttaagaaatgtggagccaatatatggctttacacctggagat
cccctgaggttcaaaagggctgttggacacaaggatttattctatattgatgacaaggat
gtggaatttaaagatgttattgaggcgcctttaccaaaagcaccacttgatacgtcagtt
acctctcactggctggcaattgaaggtgttcaacctgcaattccagaaaatgctccagtt
gaagcacttgcggcaacttctgatggaaaaaaatctgagtacacagaagatagacttccc
attgacattaaattacctgttaagcatgttctatcaagggagcttcagctgtactttgaa
aaagtcacagaactaactgtgaataagtctggctctgtcctcttcaaacaagcattgttg
agcttggcaacagatgcaggactgcatcctttactcccgtacttcacatacttcattgct
gatgaggttacacgtaatttgaacaattattctgtcctgtttgctttgatgcgtgttgtt
cgaagccttcttcaaaatccacacattcatatagaaccttatctacaccaattgatgcca
tctgttattacatgccttgttgcgaaaagattagggaatagatcttctgacaatcattgg
gagcttagggactttacagcaaacctggttgcttcaatatgccaaagatttgggcacgtt
tatcacaaccttcagccacgtgtcacaaggactctgctccatgctttcttggacccaacc
aaagcattgtctcaacactttggtgcaattcaagggctagcagcccttggacccagcgtg
gttcgtatgcttatattaccaaatcttgagccatatttgcaacttctggttccagaaatg
ctgcttgagaagcaaaagaatgagatgaagaggcgcgaagcttggcgtgtttatggtgcc
ttgctgtgtgcagctggccaatgcatgtacgatcggctcaagatgtttcgcactctgctt
tcaccaccaactcgtgcagtctggaagatcaatggaaaagttgtgactacaatgcgaaat
aaacgcaaggccagcacggacaacttaatgcagcaacaaccactcaagaaaatagcaact
gagagcacaatgggtgtggtaccaatgaactccatgcaagggacaacagttgggtattcc
actgctgtaggaggttccagcactggtttgtcatcaatgtctcggcagttaccagctgaa
aacatttctggaaggggggagattggtggtagggcggtaaaagtttctaccgttctttct
caggcttggaaggaggacatggatgcaggacatatgttggggtctttgtttgaatttttt
ggtgaaagtctgttttcttttaccccaaaacccgagcttgccttcttcttgtga
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