Juglans regia (English walnut): 108984949
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Entry
108984949 CDS
T05245
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
jre
Juglans regia (English walnut)
Pathway
jre03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108984949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
108984949
03036 Chromosome and associated proteins [BR:
jre03036
]
108984949
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108984949
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108984949
PBAF complex
108984949
GBAF(ncBAF) complex
108984949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
108984949
NCBI-ProteinID:
XP_018812605
UniProt:
A0A2I4DZN0
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All DBs
Position
11:27251209..27255355
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AA seq
534 aa
AA seq
DB search
MAEAKTMAAISPPKDPLGPSDGTPYKPALSSQTHFTTAATTPPVKPETPTTPTPTPTPTP
TPTPTTTISRETPPATTTTTSSKPPDPLPPKSSDAGVVHVPSYSRWFSWQKIHDCEVRFL
PEFFDSLSRSKNPGVYMYYRNSIVKQFRENPLRKLTFTDARKTLVGDVGSIRRVFDFLEA
WGLVNYSPSAHNKPLRWDDKETKSESKSGGGSGAPLDSSAAGPNRESSKVVCSGCKLVCS
IACFACDKYDLTLCARCYVRGNYRVGVNSSDFRRVEISEDMKADWSEKETLHLLEAIMHY
GDDWKRVAKHVGGRSEKECVNQFIKLPFGEEYLKYPDSGDVDNKYNPVKDQVTECALESS
GASCNNKRTRLTPLADASNPIMAQAAFLSTLAGVDIAEAAARAAVRSLLQVDHGASREHL
GTLARNTELQEADVASNGDAARNASEGAYVEANSQLQNEELNVERVVSGITLQMKEIQDK
LVHFEELDLQMEKEWQQLEQMKNMLFVDQLTLLFHRSSAPKTDERMEQKNIRTD
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggctaagacaatggcggccatttcaccaccgaaagaccccctcggcccctcc
gatggaactccatacaaacctgccctttcctcccaaacccacttcaccaccgcagccact
acgccgcctgttaagcccgagacgcccaccaccccaaccccaaccccaaccccaacccca
accccaacccccacaactaccatctcccgagaaacccctcctgctaccaccaccaccacc
tcttcgaagcctcctgatccactgcctccgaaatcctccgatgccggcgtcgttcacgtt
cccagctactcccgttggttttcatggcaaaaaatccacgactgcgaggtccggttcctc
ccggagttcttcgactctctctctcgctccaagaaccctggggtttacatgtactacaga
aactccatcgtcaagcagttcagggagaaccccttaaggaagctcaccttcacggacgcc
aggaagacgctggtcggcgacgtgggctcaattcggagggtctttgatttccttgaggct
tggggtctggtcaactactccccctccgcgcacaacaagccgctcaggtgggacgacaag
gagaccaagtccgaatccaaaagcggcggcggcagtggtgcgcccctcgactcttccgcg
gcaggtcccaatagagagagttccaaggtggtgtgcagtgggtgcaagctcgtttgcagt
attgcttgctttgcttgtgataagtatgacctgactctttgtgcaagatgctatgttcgt
gggaactaccgggttggtgtcaactcctcagatttcagacgggttgagatcagtgaagat
atgaaggcagattggtcggaaaaagaaactttgcatcttctggaagctataatgcattat
ggtgatgactggaagagagttgcaaaacatgttggtggcagaagtgagaaggaatgtgtc
aatcagttcattaagcttccttttggggaggaatatcttaaatatccggactctggggat
gttgacaacaagtacaatccagtgaaggatcaagttactgaatgtgcattagaaagttct
ggtgcttcatgcaacaataaaagaacgcgtctcacaccccttgcagatgcaagcaaccca
attatggctcaggctgcatttctgtcaactttggcgggtgtggacattgcagaagctgct
gctcgtgcggcagttaggagtctcttgcaggtggaccatggagcaagtagagagcatctt
ggtacccttgccaggaatacagaattgcaagaagctgatgttgcatctaatggtgatgcc
gcacggaatgcatcagaaggagcttatgtagaagcaaattcacaacttcagaacgaagag
ctaaatgtggagagagtggtttctgggattactctgcagatgaaagagatacaagataag
cttgttcattttgaggagctagatctacagatggagaaagaatggcaacagttggagcaa
atgaagaacatgctctttgttgatcagctcaccctcttatttcatagaagttctgcacca
aaaactgatgaacgaatggaacaaaagaatataagaacagattga
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