Juglans regia (English walnut): 108984990
Help
Entry
108984990 CDS
T05245
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03013
Nucleocytoplasmic transport
jre03015
mRNA surveillance pathway
jre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108984990
09122 Translation
03013 Nucleocytoplasmic transport
108984990
03015 mRNA surveillance pathway
108984990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
108984990
03041 Spliceosome [BR:
jre03041
]
108984990
03009 Ribosome biogenesis [BR:
jre03009
]
108984990
03012 Translation factors [BR:
jre03012
]
108984990
Enzymes [BR:
jre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108984990
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108984990
mRNA cycle factors
Stress granule specific factors
108984990
Spliceosome [BR:
jre03041
]
Complex C
Other components
EJC/TREX
108984990
Ribosome biogenesis [BR:
jre03009
]
Eukaryotic type
90S particles
Helicases
108984990
Translation factors [BR:
jre03012
]
Eukaryotic type
Initiation factors
eIF-4
108984990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-GeneID:
108984990
NCBI-ProteinID:
XP_018812654
UniProt:
A0A2I4DZS6
A0A833WXT9
LinkDB
All DBs
Position
13:complement(2997091..3001471)
Genome browser
AA seq
409 aa
AA seq
DB search
MSDVGGASMVRPNARRVSVPEDALEFETSREVQVVSSFDQMGIKDDLLRGIYNYGFEKPS
AIQQRAVVPILIGRDVIAQAQSGTGKTSMIALAVCQKVDTATREVQALILSPTRELAAQT
EKVILAVGNYINIQVHACIGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRHIK
LLVLDESDEMLSRGFKDQIYDLYRYLPPELQVVLISATLPHEILEMTNKFMTDPIRILVK
RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNF
TVSSMHGDMPQKERDAIMAEFRSGQTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYI
HRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgtcggcggcgccagcatggtccgtccaaacgcgcggcgcgtgagcgttcct
gaggatgcgctggagttcgagacgtctcgggaagtacaggtggtttcgagcttcgatcag
atgggcatcaaggacgacctactccgcggcatctacaattatggtttcgagaagccctcg
gcgatccagcagagggccgtggtgcccatactcattggccgagacgtcatcgcccaggcc
cagtccggtacgggcaagacctctatgatcgctctcgctgtttgccagaaggttgatact
gcaaccagagaggtccaggccttaatcttgtcaccaacaagggaattggcggctcagaca
gagaaggtgatattggcagttggtaattacataaatattcaagtacacgcatgcattgga
ggcaagagcgtgggtgaagatatcagaaagctagaacatggagttcatgtggtgtctgga
actccaggcagagtctgtgacatgatcaagaggaggacacttcgtaccagacatatcaaa
ttattagttcttgatgaatctgatgagatgttaagcagaggtttcaaggatcagatttat
gatctgtacagatatctcccaccagagcttcaggttgtcttaatttctgctacccttcct
catgaaattctggagatgacaaacaagtttatgacagatcctatacggatacttgtgaaa
cgtgatgaattgactctggagggcatcaagcaattttttgttgcagttgagagggaagag
tggaagttcgatactctatgtgatctttatgacacccttacaattacccaagctgttata
ttctgcaacactaagcgaaaggtggattggctaactgaaaagatgcgaagcaataacttt
actgtttcatcaatgcatggagacatgcctcaaaaggagagagatgcaattatggctgaa
ttccgttctgggcaaacccgtgtcctaataacgacagatgtttgggctcgggggctggat
gttcagcaggtttcgctggtgatcaattatgaccttccaaacaatcgtgagctttacatt
catcgtattggtcgttctggtcgatttggaagaaagggtgttgcgataaactttgtcaaa
agtgacgatattaaaatcctaagagacatagagcaatattacagtactcagattgatgaa
atgccgatgaatgttgctgatctgatctga
DBGET
integrated database retrieval system
