Juglans regia (English walnut): 108985018
Help
Entry
108985018 CDS
T05245
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre00040
Pentose and glucuronate interconversions
jre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108985018
Enzymes [BR:
jre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
108985018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
DUF6130
NosD
Motif
Other DBs
NCBI-GeneID:
108985018
NCBI-ProteinID:
XP_018812687
UniProt:
A0A2I4DZW2
A0A833X8E6
LinkDB
All DBs
Position
13:complement(12798016..12800558)
Genome browser
AA seq
439 aa
AA seq
DB search
MTEASKNVFQILFFVSFAIVVPSLHANISEWDGYWKHRSDEALKANLAAYDPHPEKITDD
FNSHVDKVLTGSNSTRRNLKKNTGPCTATNPIDRCWRCDPDWVKNRKKLADCVLGFGRNT
VGGKYGPYYVVTDSSDDDLVNPKPGTLRHAVIQKGPLWIIFAGSMIIRLHEELIMTSDKT
IDARGANVHIANGAGITIQFIKNVIIHNLHIHNIYAGNGGLIADSVDHFGIRTPSDGDGI
SIFGSSNVWIDHVSMSQCKDGLIDAIMGSTGITISNCHFTDHNEVMLFGASDSYSGDEIM
QITVAFNHFGRGLVQRMPRCRWGFVHVVNNDYTHWLMYAIGGSSHPTIISQGNRFIAPPD
LTAKEVTKRDYATESEWSSWTWRSEGDLMMNGAFFVQSGEKLKNKAFSRLDMIKSKSGTY
VRRLTRHSGSLKCQPGKPC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagctagcaaaaatgtttttcagatcttgttttttgtgtcattcgctattgtt
gttccaagccttcatgccaacatcagtgaatgggatggttattggaagcaccgttctgat
gaggctctaaaggctaacctcgcagcctatgatccacatcctgagaaaatcactgatgac
ttcaactctcatgtcgacaaggttttgacagggagcaatagcacaagaagaaacttgaag
aagaacacaggcccatgcacagccaccaaccccattgaccgatgctggaggtgtgacccc
gactgggtcaaaaaccgaaagaagctagctgactgcgtccttggctttggccgtaacacc
gttggtggaaaatatggtccttattatgttgtgactgattcctcagacgatgacttggtg
aatcccaaacccggaaccctccgccatgccgttatccaaaaagggcccctctggatcatc
tttgcaggcagcatgattattaggctccatgaggagttgatcatgaccagtgacaaaacc
attgatgcaagaggagccaatgtgcacatcgctaatggcgctggaatcaccatacaattt
atcaagaatgtgatcattcataacctccatatccataatatttacgcgggtaacggcgga
ctcatcgcagactctgttgaccatttcggtattaggactcctagtgatggtgatggtatc
tccatctttggctcatccaacgtctggattgaccatgtttccatgtcccagtgcaaagat
ggcctcatcgatgccatcatgggatcaactggtattactatctccaactgccatttcacc
gatcacaatgaggtgatgttgttcggagcaagcgacagctactccggtgacgagataatg
caaatcacagtcgccttcaaccacttcggtaggggattggtgcagaggatgccgaggtgc
cgatggggattcgttcatgtggttaataatgactatacgcactggctcatgtatgccatt
ggcggtagcagccatcctaccattatcagtcagggtaatcggttcattgctcctccagac
ttgactgctaaagaggtgaccaagagggactatgcaactgagagcgagtggagttcatgg
acatggagatccgagggagatctgatgatgaatggagcattcttcgttcaatcaggggaa
aaactgaaaaataaggcattctccaggctggatatgatcaaatcgaaatcagggacatat
gtgaggagactcacacgccactccggttcgcttaaatgccaaccaggaaaaccttgttaa
DBGET
integrated database retrieval system
