Juglans regia (English walnut): 108985055
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Entry
108985055 CDS
T05245
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108985055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
108985055
Enzymes [BR:
jre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
108985055
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
108985055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
108985055
NCBI-ProteinID:
XP_018812746
UniProt:
A0A2I4E032
LinkDB
All DBs
Position
7:44669716..44676952
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AA seq
829 aa
AA seq
DB search
MVSSEGLSPSPASASKQHGVTKPISTAGPSEADRQRNKELEKFLVDAGLYERKEEAAKRE
EVLGRIRQIVKDWVKQLTRLRGYTDQMVEDANAVILTFGSYRLGVHGPGTDIDTLCVGPS
YVNREEDFFFILHNILAEMEEVTELQPVPDAHVPVMKFKFDGIPIDLLYASISLLVVPED
LDISDVSVLYNVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVT
GFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDKLGFSVWD
PRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQLGNKFCEEIELNKAQWNAL
FEPYLFFESYKNYLQVDIVAADVDDLLAWKGWVESRLRQLTLMIERDTLGKLQCHPYPHE
YVDTSKQCAHCAFFMGLQRKQGEMIQEGQQFDIRGTVDEFRQSVNMYMFWKPGMEIYVSH
VRRRQIPSYVFPDGYKRSRPSRPTAQQQANKPSHEYGEVGRTGSGERCLKRKNDTDVQGI
PEKGRSITPQSQGSISPENGSSERCLKRKNGTDVQGIPEKGRCITPQREDSISPEIITDE
FSSASPEHLVSHMVGNKTSAETNRILQGYNSKVEGLASNGLRTGIGSVSRELRWIDGDKG
SAGELAEAEKGMLCQETETACASNSSIITTPTSEGSFCEDSGFVPVAGSSVGESIAGANN
LGSSLGDLCEAHSMLPLEDGCVNCDGVSQDGSLEELEPNAALEMVINASGGVNSEAVQKQ
VLRHACMVYLAKSKPVRAPTKEPCGVSSAMRVQFIMLRIILPSTGCSGA
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggtgagttcagaggggctgagtccttcgccggcttcggcatcgaagcaacacggcgtg
acgaagccaatatcaacggcggggcccagtgaagccgatagacagagaaacaaagaactg
gagaagttcttggtggatgctgggctttacgagagaaaagaggaagctgccaagagagag
gaggttcttggtcgaattcgccagattgtaaaagattgggtgaagcaacttactcggctg
agaggatacactgatcaaatggtggaggatgcaaatgctgtcatccttacttttggttct
tatcgacttggggtacatggtcctgggactgacatagacacattgtgtgtggggccatca
tatgtgaatcgggaggaagacttcttctttatattgcataacatcttggcagaaatggaa
gaagtcacagaactgcaaccagttccagatgctcatgtcccagtaatgaaattcaagttt
gatggaatacccattgaccttctttatgcaagtatttctctcttggttgtaccagaagac
ttggacatctctgatgtctctgtattgtacaatgttgatgagcccaccgttcgaagtctt
aatggctgcagggttgctgatcaaattttgaagcttgttccaaatgtcgagcatttttgt
accacactccggtgcttgaagttttgggccaagaggcgtggtgtttattccaatgtgact
ggatttcttgggggtgttaactgggcacttcttgtagctcgtgtatgccagctctatcct
aatgcagttcccagtatgcttgtttctcgattttttagggtctatacacagtggcgttgg
ccgaaccctgtgatgttatgtgcaattgaagaggacaaacttggattttctgtttgggat
ccacggaagaaccctcgagaccggactcatcacatgcccatcataacgcctgcttaccct
tgcatgaattctagctacaacgtttcgacaagcactctcagggttatgatggagcagttc
caacttggtaacaaattttgtgaggagattgaactcaataaagcccaatggaatgctctg
tttgaaccatacttgttctttgaaagctataagaactaccttcaggtagacatagttgca
gctgatgtcgatgacttgcttgcttggaaaggctgggtggaatccaggctgaggcaattg
actctgatgattgagcgagacacgttggggaagttgcagtgccatccttatcctcatgag
tatgtggatacatccaagcagtgtgcccattgtgctttctttatgggtttgcaaaggaaa
cagggggagatgattcaagaaggtcagcagtttgatatccgtgggaccgtagatgaattc
aggcagtctgtaaacatgtacatgttttggaaaccagggatggaaatttatgtttcacat
gttcgtagaaggcagatcccttcatatgtgttccctgatggttataaacgatctcgacca
tcgaggccaactgcccagcagcaggccaataaaccctctcatgaatatggtgaagttggt
aggactggctctggtgagagatgccttaagaggaaaaatgatactgatgtgcaaggtatc
cctgaaaaagggcgatctataacccctcagagtcagggttcaatttctcctgagaatggc
tccagtgagagatgccttaagaggaaaaatggtactgatgtgcaaggtatccctgaaaaa
gggcgatgtattaccccacagagagaggattcgatttctcctgagattattactgatgag
ttcagtagtgcgtctccagagcatttggtgtctcatatggtgggaaacaaaacatctgct
gaaacaaacagaatattgcagggttataatagtaaggtggaaggtctggcatcaaatgga
ttgagaactgggattggatctgttagccgagagctgcgctggattgatggtgataaaggt
tctgctggggagctagctgaagcagaaaaagggatgctatgccaagaaactgagactgca
tgtgcatcaaattcgagcataataacaactcctactagtgagggcagtttttgtgaggat
tctggatttgtaccagtggcaggtagcagtgtgggagaaagcattgcaggggctaataac
ctgggttcttctctgggcgatttgtgtgaagcacattccatgttgcctttggaggatgga
tgtgttaattgcgatggagtttcgcaagatggatcgctggaagagttagagccaaatgct
gcacttgagatggtgataaatgcatcaggtggtgtgaactcagaagctgtgcagaaacaa
gtgttaaggcatgcttgcatggtctacctcgcgaagtcaaaaccagtcagagcaccaact
aaagagccctgtggggttagttctgccatgcgtgtacagtttataatgttaagaattata
ctcccaagtactggatgctctggagcttag
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