Juglans regia (English walnut): 108985172
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Entry
108985172 CDS
T05245
Name
(RefSeq) rRNA biogenesis protein RRP5 isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jre03009
]
108985172
Ribosome biogenesis [BR:
jre03009
]
Eukaryotic type
90S particles
Other 90S particles
108985172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
OB_RRP5
Spt6_S1
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
108985172
NCBI-ProteinID:
XP_018812909
UniProt:
A0A833XAY5
A0A2I4E0J1
LinkDB
All DBs
Position
8:24531659..24576415
Genome browser
AA seq
1928 aa
AA seq
DB search
MGVKKNFRDGQKKNKSIMDGSKFGKASKQPFKTTKGSNDAVKSAALALQLEDEVPDFPRG
GGSSLSRQERDEIRAEVDAEFEAEEWDQKKNRRKKMQKKTQATEDDFGSLFGDGITGKLP
RYANKITLKNVSPGMKLWGVVAEVNEKDLVIGLPGGLRGLVRMADALDLDVKSEITDLEN
NILPSRFHVGQLVSCIVLQLDDDKKDVGKRKLWLSLRLSLLHKGCTLESVQEGMVLTAYV
KSIQDHGYILHFGLPSFTGFLLKNDQAVRGEVDVKIGKLLQGIVGKIDKVRQVVYLNCDS
DTVSKCVTKDVKGISIELLVPGMMVNARVQSTLENGVMLSFLTYFTGTVDIFHLQNSFPS
ANWKDDYSQNKKVNARILFIDPSTRAIGLTLNAHLVHNKAIPSNVKVGDIYDDSKVVRVD
KGLGLLLEIPSTPVSTPAYVSISDVAEVEVLKLEKKFKEGSHVRVRVLGFKHLEGLATGI
LKATAFEDSVFTHADVKPGMVVRARTLAVDSFGAIVQFPGGMKALCPVQHMSEFEIAKPG
KKFKVGAELVFRVLGCKSKRITVTHKKTLVKSKLGILSSYADAAEGLITHGWITKIEKHG
CFVRFYNGVQGFAPRSELGLEPGCDPNTMYHVGQVVKCRIMSSVPASRRINLSFIIKPAS
GRVSEEDKVTLGSLVSGVVDGVTTHGVIVYVNAKGYSKGTISPEHLADHQGHAALMKSVL
KPGYEFDQLLILDIVGNNLVLSAKHSLIKFSQQLPLDLSQIRPNSVVHGYICNLIETGCF
VRFLGRLTGFSPRNKATDDQRVELSESFYIGQSVRSNILDVSNETGRITVSLKQSSCYST
DASFIQEYFVLEEKIARLRSLESKGSELKWVEGFSIGSVIEGKIQEVKDIGVVVSFEKYL
DVFGFITHYQLGGTTPKTGSLVRAVVLDVSVAEHLVDLSLKPEFFYESRGGSLKSQSHKK
KRRREPSMDLEVDQTVNAIVEIVKENYLVLSVPEYNYAIGYASLSDYNTQKFPRKQFLNG
QSIIVTVMALPSPSTFGRSLLLLNTKSEASETKRSRKKSTCEVGSLVQAEITEINPLGLK
LKFGLGFHGRVHITEVKDVNALEDPFSNLRIGQTVTARVIAKAKQSDKKSYQWDLSLKPK
ILADSFEMEGKLMAKDVDFSTGQCITGYVYKVDSEWVWLTVSRDVRAQLFILDSASDPSE
LEGFQKRFHVGKGVSGRILSINKEKKLLRLVLRPSFAVANGNVAGVDLKMDDHLKDVTSY
VHEGDIVGGRISKILAGVGGLLVQICPQLYGRVHFTELRDSWVPDPLSGYYEGQFVRCKV
LEVSRSVKGTIQVDLSLRSSLDGMLTESSAEICNIQQPHSKRVEKMEELHPNIVVQGYVK
NVTSKGCFIWLSRKIDAKILLSNLSDGYVENPEKEFPVGKLLTGRVLSVEPLSKRVEVTL
KTLGRSSSSKSEIDALRTLRIGNIMSGRIKRVESYGLFITIDDTNLVGLCHVSELSDDHV
ESIETKYRAGERVTAKILKVDEQRCRISLGMKGSYIGDGIDFQLPSQQEPDEAIRDNGFT
TLLISPGSSLLGAQSMYTEDENGDCSILAQAGSRASIPPLEVSLDDIDQSNIDNLVGQDQ
ENIDEAATVHEKNKRQAKKKAKKEREQEIRAAEERLVENGIPRTADEFEKLVRSSPNCSF
VWIKYMAFMLSMADVEKARSIAERALNTINFREENEKLNIWVAYFNLENEYGNPPQAAVT
NVFQRALQYNDPEKVHMALLGMYERTEQHKLADELLDKMTKKFKRSCEVWLRLVQRMLKQ
QQDVVQPVVNRALLSLPRHEHIKFISQTAILEFKYGVPDRGRSMFEGILREYPTKKYYWS
IYLDQEIRLGDVDVIRALFERAISLSLARKKMKVLFKKYLKFEESNGDEERMESVRRKAM
EFVQSTMA
NT seq
5787 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaagaagaattttagggatggccagaagaaaaacaagtctatcatggacggt
tccaagttcggcaaagcttccaagcaaccattcaaaacaaccaagggctcgaacgatgct
gttaagtctgcagcgctagccttgcaactagaagatgaagtccctgatttccccagaggt
gggggaagttctctgagccgacaagaacgcgatgaaatccgtgctgaagttgatgctgag
tttgaggctgaggagtgggatcagaagaagaataggagaaaaaagatgcagaagaagact
caggcaacagaggacgattttggttctctttttggtgatggcataactggaaagctacct
agatatgcaaataagatcactttgaagaatgtatcccctggaatgaagctttggggagtt
gttgctgaagtaaatgagaaggaccttgtaattggtctgcctggaggcctacgtggatta
gttcgtatggctgatgctttggatcttgacgtgaaaagtgaaattacggacttggaaaat
aatatccttcctagtcggttccatgttgggcagctggtttcttgcatagtgttgcagctg
gatgatgataaaaaagatgtagggaagcgcaagctctggctttctttgcgtctttctcta
ttacataagggttgcaccttggagtctgttcaagaagggatggtacttactgcatatgtc
aagagtatacaagaccatggttacattcttcattttggattgccttctttcacgggattt
ttgttaaaaaatgaccaagctgtgaggggggaggttgacgtgaaaattgggaaacttcta
caagggatcgttgggaaaattgataaagttcgtcaagttgtctatctgaattgtgactct
gacacagtgtctaaatgtgtgaccaaggatgttaagggaatttcgattgaacttctcgtt
ccgggtatgatggttaatgctcgtgtacagtcaactcttgaaaatggggttatgttatca
ttcctcacttactttacgggaactgttgatatttttcatttgcaaaatagtttcccttct
gcaaattggaaggatgactacagtcaaaataaaaaggttaatgcacggatattatttatt
gatccctcgactagagctattgggttgaccctgaatgcgcatcttgttcataacaaggct
attccttcaaacgttaaagttggagatatatatgatgactcaaaagtagtcagggttgat
aaaggattgggccttctgcttgaaataccatctactccagtttccactccagcatacgtt
agtatatctgatgtggctgaagtggaagtcttgaagcttgaaaaaaagttcaaggaagga
agtcatgttcgggttcgagttctaggatttaagcacttggaagggcttgctacagggatt
ttgaaggctacagcttttgaagactctgtattcacccatgcagatgtcaagcctgggatg
gttgtgagggcaaggactctagctgttgacagctttggcgctattgtgcaatttcctggc
ggtatgaaggctctttgtcccgtccagcatatgtctgaatttgaaattgcaaagcctgga
aaaaaattcaaggttggagctgagctggtattccgggtgcttggttgcaaatccaagaga
ataactgtgacacacaagaaaacacttgtgaaatcgaaacttgggattcttagttcatat
gctgatgctgctgagggattaataacacatggatggataacaaagattgagaaacatgga
tgctttgtccgtttttacaatggagtccaaggatttgctcccaggtctgaacttggatta
gagccaggatgtgacccaaatacgatgtatcatgttggacaagttgtcaaatgtagaata
atgagttcagttcctgcttctcggaggatcaaccttagtttcataataaaacctgcaagt
ggcagggtttctgaagaggataaggtcacattaggtagccttgtttctggagtcgttgac
ggggtaaccacccatggcgttatagtctatgtgaatgcaaaaggttactcaaagggcaca
atttctcctgaacatttggcagaccaccaagggcatgctgctttgatgaagtcagttttg
aagccaggatatgagtttgatcaactgctgatattagatattgttggtaacaatttggta
ctgtctgcaaaacattctctgatcaagttctctcagcaacttcctttggatctcagtcag
attcgtcccaactcagtagtccatgggtacatctgtaacttaattgaaactggttgtttt
gtccgctttcttgggcgtttgactgggttctcccctagaaacaaggcaacagatgaccaa
agggttgaactttcagagtccttttacattggacagtctgttcgtagtaatattctcgat
gtcagtaatgaaacaggtagaataactgtttccttgaagcagtcatcttgctattcgaca
gatgcatccttcattcaagaatactttgttctggaggagaagattgctaggttgcgatca
ttggaatccaaaggttctgagctaaagtgggttgaaggatttagcattggcagtgttatt
gagggaaaaattcaggaggtgaaggatattggagttgttgttagctttgagaagtatctg
gatgtttttggtttcattacccactatcaattagggggaactactccaaaaactggctcg
ctagttcgagccgtagttctggatgtttctgtggcagaacacctagtggatttatctcta
aagccagagtttttttatgaatccagaggaggaagtttaaaaagccaatctcataagaag
aaacgcagaagagaaccatccatggacttggaagtggatcaaacagtgaatgcaattgtg
gaaattgtgaaagagaattacttggtcctttcagtgccagaatataattatgctataggt
tatgcatcgttatccgactataacacccaaaagtttcctcggaaacaatttctgaatgga
caaagtatcattgtcactgttatggctcttccaagcccttcaacattcgggagatcgcta
ttgcttcttaatacgaagagtgaagccagtgagacaaaaagatccagaaagaagtctacc
tgtgaagtgggatctctggttcaggcagagattactgaaattaaccctcttgggctgaaa
ttaaaattcggactcggttttcatggacgagttcatataacagaggtgaaagatgttaat
gctttggaagatccatttagtaacttaaggattgggcaaacagtgactgcaagggttatt
gctaaagctaagcaatcagacaaaaaaagctaccaatgggatctgtcgttgaaaccaaaa
attcttgcagattcctttgaaatggagggcaagctgatggccaaagatgttgatttttca
actggacaatgcatcacaggttatgtatataaggtggacagtgaatgggtttggttaaca
gtttctcgagatgtaagagctcagctttttattcttgacagtgcatccgaccctagtgaa
ctagagggatttcagaagcgctttcatgtgggaaaaggtgtttctggtcgtattttaagt
attaacaaagagaaaaagctattacggttggttctacgtccttcatttgctgtcgcaaat
ggaaatgttgctggtgtagatttaaagatggatgatcatttgaaagatgttacatcttat
gttcatgaaggagacattgtgggtggaagaatatccaaaatacttgcaggcgttggtgga
ttgctcgtgcagatttgtcctcaactgtatggtagagtacattttacggagcttagagac
tcatgggtgcctgacccattatctggatattacgaagggcaatttgtcagatgcaaagtg
ctggaagtcagccgctctgtcaagggcaccattcaagttgatttatccttacgttcttct
ttagatggcatgcttaccgagtcttctgctgaaatctgcaacatacagcagcctcattcc
aaacgtgttgagaagatggaggaacttcatcctaatattgttgtacagggttatgttaag
aatgttacatctaaaggatgtttcatttggctttctcggaaaattgatgccaaaatcctt
ctctcaaacttatctgatggatatgtcgagaaccctgagaaagaattccctgttggaaaa
cttttgactggcagggtgttgtctgtggagcctttatcaaagcgagttgaagtgacattg
aagacattgggcagaagcagctcttcaaaatctgaaattgatgctttgagaacactgcgt
attggaaatattatgtctggcagaattaagcgggtggaatcatatggcttgttcatcaca
attgacgacacgaacttggttggattatgccatgtgtcagagctttcagatgatcatgtt
gaaagcatagaaactaaatacagagcaggggagagagtgacagcgaagatattaaaggtg
gatgaacaaagatgccgcatctctcttggaatgaaaggttcctatattggcgacggtatt
gattttcaactaccctcacaacaagaacctgatgaagccattagagataatggttttact
actttattaatatctcctggtagtagtttgcttggggctcaaagtatgtatactgaagat
gaaaatggagattgctcaattcttgcacaagcaggatcaagggcttccattccaccactt
gaggtcagtcttgatgacatagatcaatccaatattgataatttagtcggtcaagaccaa
gagaatattgatgaggcagccactgtacatgaaaagaacaagagacaggcaaagaaaaag
gcgaagaaagagagggagcaagaaattagggctgctgaggaaagactagtggagaatggt
ataccaagaactgctgatgaatttgaaaaactggttagaagctctcctaattgcagtttt
gtatggataaagtacatggctttcatgctctctatggctgatgttgagaaagcccgttct
attgctgaaagggctttgaacacaattaatttccgagaagagaacgagaagcttaatatt
tgggtggcttattttaatttggaaaatgagtacggaaatcctccacaggcggctgttaca
aacgtattccaaagagctttgcagtacaacgatccggaaaaggtccatatggcactcctg
ggaatgtatgagaggacagagcaacataaattggccgatgagcttcttgacaaaatgacc
aagaagttcaagcgttcatgcgaggtttggttaagacttgtgcaaaggatgctgaagcaa
cagcaggatgtggttcagcctgttgtaaatcgtgctttattaagtcttccccgccatgag
catatcaagttcatctcacagactgctatccttgaattcaaatatggggttcctgataga
ggaagatccatgtttgaaggaattctgcgggagtacccaacaaaaaaatattattggagc
atttatctcgatcaagagattcgacttggagatgtggatgtgatacgtgccctctttgag
agggcaatcagtttgagcctagcgcgtaaaaagatgaaagtcttatttaagaagtacctc
aagttcgaggagtctaatggtgatgaagaaagaatggagtctgtgagaaggaaggcaatg
gaattcgtccagagtacaatggcttga
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