Juglans regia (English walnut): 108985448
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Entry
108985448 CDS
T05245
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
jre
Juglans regia (English walnut)
Pathway
jre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108985448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
108985448
Spliceosome [BR:
jre03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108985448
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
108985448
NCBI-ProteinID:
XP_018813285
UniProt:
A0A2I4E1L8
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Position
13:15515862..15523058
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AA seq
485 aa
AA seq
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MATLADSFLADLDELSDNEADVIEEEDVDAGNMEEDVDGEMADIENLNYDDLDSVSKLQK
TQRYVDIMQKVEDALQKGSDISNLGMVLEDDPEYQLIVDCNALSVDIENEIIIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEEILDKTIDACDRALTLDAAKKKVLDFVESRMGYIAPNLSTIVGSAVAAKLMGTAGGL
AALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPSLRMRACRLLASK
STLAARVDSTRGDPSGNNGRALREEIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAA
KVAKKFKEKQYGSSGASSGLTSSLAFTPVQGIELSNPQAHAHQLGSGTQSTYFSETGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcaactctggctgattctttccttgcagaccttgatgaactatctgacaatgaagct
gatgttattgaggaagaagatgttgatgctggaaatatggaagaagatgttgatggggaa
atggcagacatagaaaatcttaactatgatgatctggatagtgtttcaaaattgcagaaa
acccagagatatgttgatattatgcagaaagtggaagatgcgctccaaaaaggctctgat
atctcaaatcttggaatggttttggaagatgatcctgaatatcagctgattgtggactgt
aatgctttgtcagttgatattgagaatgaaatcattatcatccacaattttattcgtgac
aagtacaggttgaaatttccagagcttgaatcacttgtgcatcacccaattgattatgct
cgtgttgttaagaaaattgggaatgaaatggacttgacgctggttgatctggaagggcta
ttaccgtcagctatcattatggttgtgtcagttacagcatcgactacaagtggcaagcct
cttcctgaagaaattctggataagaccattgatgcatgtgatcgagctcttactctagat
gcagcaaagaaaaaagtcctcgactttgtagaaagtcgaatgggatatattgcaccaaat
ctttctactattgttgggagtgctgttgcagctaaacttatggggactgctggtggtctt
gctgcattagctaagatgcctgcatgtaatgttcagcttcttggtgccaagaaaaagaac
cttgctgggttttccactgcaacatcacaatttcgtgtaggctatattgagcaaacagag
atatttcaatcaacacccccttctctgaggatgcgtgcttgccgtctcttggcttccaag
tcaacacttgcagcaagagtagattccacgagaggagatccatcagggaacaatggaaga
gccttacgggaagagatccgtaagaaaattgagaagtggcaagagccacctcctgcaaag
caacccaaaccacttccagtgcctgattctgagcctaaaaagaagagaggtggtcgtcga
ctgaggaagatgaaggaaagatatgcaataacagacatgaggaaactcgcaaataggatg
caatttggtgtacctgaagagagttctttaggggatggactgggagagggttacggaatg
ctcggtcaggctgggagtggcaagctgcgtgtatcagttggtcagagcaaacttgctgca
aaagttgccaagaagtttaaggaaaagcaatacggaagcagtggtgcttcctctggattg
acatcaagtttagcatttacccctgtgcaggggatagaactctcaaatccacaggctcat
gcacaccaacttggcagtggaactcaaagcacgtacttttccgagacaggaacattttca
aagatcaagcggacctga
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