Juglans regia (English walnut): 108985658
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Entry
108985658 CDS
T05245
Name
(RefSeq) DNA mismatch repair protein PMS1 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
jre
Juglans regia (English walnut)
Pathway
jre03430
Mismatch repair
jre03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108985658
03460 Fanconi anemia pathway
108985658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jre03400
]
108985658
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
108985658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
108985658
NCBI-ProteinID:
XP_018813579
UniProt:
A0A2I4E2F6
A0A833UNM2
LinkDB
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Position
8:complement(11611191..11627290)
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AA seq
898 aa
AA seq
DB search
MEAAVTPADSPTVIKPINKGAVHRICSGQVILNLSSAVKELVENSLDAGATSIEIALKEY
GEEWFQVIDNGSGISPNNFEVLALKHHTSKLSEFPDLQSLTTFGFRGEALSSLCALGNLT
VETRTKNESVATHLTYDHSGSLAAEKKTARQIGTTVTVKKLFSNLPVRSKEFKRNIRKEY
GKLISLLNAYALIAKGVRLVCSNTTGKNAKSVVLKTQGSDSLKDNIITVFGMNVFNCLKP
VNICISDSCKVDGFLSKAGQSSGRNLGDRQFFFVNDRPVDMPKVSKLVNEFYKGANSRQY
PIAIMNFTIPKGACDVNVTPDKRKIFFSDESSILHALREGLQQIYSPSNASYSVNEVEEH
TKEAYSSELHSPHEKSAVFLKQLSPDASDPKVIKEDVTESMSPLKNVEGTQQKLHDLEGS
IQNCNDKFMEKDFTLRVHGTKRADNCRQLTGLLNSSKTNQISSPSTRAVENKIVASTDSS
SRSSYVQSALNKFVTVNKRKHENVSSALSELPVLRNETLSCPLRDSESKRQSAVSRSSAG
NDWVDNSVVMNENEPSKYLRAEKILGKIGNPLSSGGHPNDAEPRKELVDQEIAVPSSITV
SIDSSSKDLNHASMCSTLQFSFEDLKAKRQQRLSSFQFNDYKPGIMKKKRCYAAATLELS
QPDNEDRKEKALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADE
KYNFEHLSQSTVLNQQPLLRPLRLELSPEEEVVASMHMHTIRKNGFSLDEDPHAPPGRRF
ILKAVPFSKNVTFGVEDVKDLISTLADSQGECSIIGSYKMDTYDSVCPTRVRAMLASRAC
RSSVMIGDALGRNEMQKILQHLAELKSPWNCPHGRPTMRHLVDLTTIHKSSEEKDANL
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagcagtgactccagctgattctccaaccgtgataaaacctataaacaaaggc
gcggttcacagaatctgctccggccaagtgattctgaacctctcgtccgctgtaaaagaa
ttggtcgagaacagcttggacgccggcgccaccagcattgaaatcgctctgaaagagtac
ggcgaagagtggttccaggtcatcgacaatgggtccggcatttcacccaataacttcgag
gttttggcgctcaagcatcatacatcaaaattatctgaatttcctgatcttcagtcattg
accacatttggcttcagaggggaggcattgagttctctttgtgctttagggaatttgact
gttgagactaggacaaagaatgagtcagttgcaacacacttgacttatgaccattccggc
tcattggcagctgaaaagaaaactgcacgtcaaattggtaccacagttactgttaagaag
ttgttctccaatttaccagtgcgaagcaaagaattcaagcgcaatatccgcaaggaatat
gggaagcttatttcattactgaatgcctatgccttaattgcaaaaggcgtgcggttagtc
tgctctaacacaacagggaaaaatgcaaagtctgtggttcttaaaacacaaggaagtgat
tcccttaaagataacatcattacagtgtttggcatgaatgtctttaactgcttaaagcct
gtgaatatatgtatatcagacagttgcaaggttgatggattcctttccaaggctggacag
agtagcggacgcaacttgggagatagacaattcttttttgtaaatgaccgaccagtggat
atgcctaaagtcagcaagctggtgaatgagttctataaaggtgcaaactcccggcaatac
ccgattgcaatcatgaactttaccattccgaaaggagcatgtgatgtcaatgtaactcct
gataaaaggaaaatatttttttctgatgaaagctccatactgcatgccctgagggagggt
ttacagcagatatattccccaagtaatgcctcttattctgttaatgaagttgaggagcat
actaaggaggcatatagctctgagttgcattctcctcatgagaaatctgctgtgttctta
aaacaattatctccagatgccagtgatcccaaagttattaaggaggatgtcacagagagt
atgagtcccctaaaaaatgttgaaggcacccagcagaaattgcatgatttagaaggatca
atccaaaattgtaatgacaaattcatggagaaagattttactcttagagttcatggcacc
aagagggctgacaactgtaggcaattgactggcctcctcaacagttctaaaaccaatcaa
atttcttctccctctacacgagcagttgagaataaaattgttgccagtacagattccagc
agtcgttcaagctatgttcagtccgcactcaacaaatttgtgactgtcaataaaagaaag
catgaaaatgttagttcagcattatctgaactgcctgttcttagaaatgaaactctttct
tgtcctttaagggatagtgagtctaaaaggcagtctgcagtttctagatcctcagctggc
aatgattgggtggataattctgttgtcatgaatgagaatgagccttccaagtatctccga
gcagagaagatccttggtaaaattggaaatccactttcttctggaggccatcctaatgat
gcagaacccagaaaggaactggtggatcaagagatagcggtgccttcttctattacagta
tcaattgattcatctagcaaggatctcaaccatgcatctatgtgttccacattgcaattt
agttttgaagacttgaaggcaaagaggcagcagaggctatcctcattccagtttaatgat
tacaaacctggaataatgaagaagaaaaggtgctatgctgctgcaactctggagctttct
cagccagataatgaggatcgaaaggaaaaggctttagcggcagctaccactgaattggaa
agacttttcagaaaggaggactttggtagaatgaaggtaattgggcagttcaaccttggt
tttattattgggaagttagatcaagatttatttattgtggatcagcatgctgctgatgag
aagtacaattttgagcatctttctcaatcaaccgtcttgaaccaacagcctttgctccgg
ccattgaggttggagttatctcctgaagaagaagtggttgcttcaatgcacatgcacaca
attaggaaaaatggcttttctttggatgaggatcctcatgctccacctggacgacgtttt
atattaaaagctgttccattcagtaaaaacgttacttttggagttgaagatgtcaaagac
ctgatttctacacttgctgatagccaaggggaatgctcaataattggtagttacaaaatg
gacacttacgactctgtttgccctacaagagttcgtgcaatgctggcatcacgtgcatgc
agatcatctgttatgattggggacgcactcggtagaaatgagatgcagaagatactccag
catttggcagagctgaagtctccttggaattgcccgcatggtaggcccaccatgcgacat
ttggtcgacttgacaaccattcataaaagttcagaagaaaaggatgccaacttgtaa
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