Juglans regia (English walnut): 108985761
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Entry
108985761 CDS
T05245
Name
(RefSeq) small RNA degrading nuclease 1-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108985761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jre03009
]
108985761
Ribosome biogenesis [BR:
jre03009
]
Eukaryotic type
Pre-60S particles
RNases
108985761
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DEDDh_C
SRP54_N
Motif
Other DBs
NCBI-GeneID:
108985761
NCBI-ProteinID:
XP_018813726
UniProt:
A0A2I4E2U9
LinkDB
All DBs
Position
12:961650..970352
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AA seq
524 aa
AA seq
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MDELFDTAEKKVLVDMVRLAQKHGMKGIKGDWKEFLDFHDKKFGASLSDPTRRSIDMLSA
FLKTFTKEDDLKFFAKIMQCHLKRNLVDQLTKTSADDEIPEQRLVRLTLEHPQYPSDYSF
PSNDEEWVVIKLSKKSKVMRSNAMLAVDCEMVLCEDGSEALVRICVVDRNLQVKLDEHVN
PGKAVADYRTDITGISATDLKGITCSLADVQKSMKMLLFKGTILVGHSLNNDLKALKMDH
ARVIDTALIFKYLDGSINRRPSLNNLCKSVLGYEVRKKGAPHNCLDDACAAMKLVLAKID
NGVDKAIPLVQEDVPESEMAKLLLHRIPNNVPPEELHKVIPADFTIELKPSRKVKGDKYS
AFAIFKNPHEAHQAYETVKGSQEKDSLGRPQKLVELKLTTGMVTSLYVRKMAPDDSLGQI
SFKKRAFQAEEAPGASKMLKTNPKTEEDSSNQCCDDLALIERKKQELSKRERGDPNHSCD
HLKEIERLKQELIERDVRLTAQDKIITHLRKRLNSRYGKRRPKV
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctattcgacaccgcggagaaaaaggtccttgttgatatggtgaggttggcc
caaaaacatggaatgaagggtattaaaggagactggaaggaatttttggattttcatgac
aaaaagttcggggctagcttgagtgatccgacaaggaggtccattgatatgttgtctgct
tttctgaagactttcactaaagaggatgatttgaagttttttgctaaaataatgcaatgc
catttaaagcgcaaccttgtggatcaacttacaaagacatctgcagatgatgaaatcccc
gagcagagacttgttcgtttaactcttgaacacccacaatacccatcggattattcgttc
ccatcaaatgatgaggaatgggtggttataaagctcagtaaaaaatctaaggtgatgaga
tcaaatgcaatgcttgctgttgattgcgagatggtactctgtgaagatggttctgaagca
ttggtgagaatatgtgttgtggatcgtaacttacaggtgaaacttgatgaacatgtaaac
cccggcaaagcagttgcagattatagaactgatattacaggcattagtgcaaccgattta
aaaggaattacttgttcattggcagatgtacagaaatccatgaagatgctgttgttcaag
ggaactatattagttggtcacagtttaaataatgacctgaaagccctgaagatggatcat
gctagagtgattgacaccgcacttatctttaaatatttggatggatctatcaatagaaga
ccatctttgaataacttgtgcaagtctgttttgggctatgaagttcggaagaagggtgct
ccacacaattgtctagatgatgcctgtgccgcaatgaaacttgttcttgctaagatagat
aatggtgttgataaggctattccactggttcaagaggatgtacctgaatctgaaatggca
aagctacttctccacaggataccaaacaatgtgcctcctgaagagttgcataaagtcatt
cctgcagattttaccattgaactcaagccatctaggaaagtgaaaggagacaaatattct
gcattcgctatattcaagaatccacatgaggcacatcaagcatacgaaactgtcaaaggc
agccaagaaaaggactcattggggaggcctcagaaacttgtcgaacttaagctcacaaca
ggcatggttaccagtctatatgtccgtaaaatggcccctgatgattcccttggccaaata
tcattcaagaagagagctttccaagctgaggaagccccaggtgcatccaagatgctaaag
accaatccgaaaactgaagaggattcctcaaatcagtgctgtgacgacttggcactgatt
gaaagaaagaaacaagaacttagtaaaagagagagaggagatccaaatcacagttgtgat
cacttgaaagagattgaaagattgaagcaagaattgattgaaagggatgttcgactcacc
gcgcaggacaagataataactcatcttagaaaaaggctgaactcaagatatggtaaacgt
cgccctaaagtatag
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