Juglans regia (English walnut): 108985948
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Entry
108985948 CDS
T05245
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
108985948
Spliceosome [BR:
jre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108985948
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
108985948
NCBI-ProteinID:
XP_018813974
UniProt:
A0A2I4E3J7
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All DBs
Position
10:1230734..1237715
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AA seq
466 aa
AA seq
DB search
MSTSGQPQFRYTQTPSKVLHLRNLPWECAEEELIELCKPFGKIVNTKSNVGANRNQAFVE
FADLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDVPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFSDAETASAARNALNERSIPRYLL
PEHVNSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIDGIAQPALGPDGKRKEP
ESNVLLASIDNMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDISTAAVARE
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDASLLAAQPVSGLPGAPAAW
QNPQAGPIYPGNDFTAGGAAPPHYPGGQMAPWDPTMQAGRTSYGSVASTYPGQPFAASVP
AYATAPLTPTGQIPTTVTSMGFSPTVPTNVRPGDASPRGQHTYYGQ
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacatcggggcagcctcagttccgctacacccagaccccctcgaaggtcctccac
ctccgcaatctcccctgggagtgcgccgaggaggagctcatcgagctttgcaagcccttc
ggcaagatagtcaacaccaagagcaacgtcggcgccaatcgcaaccaggccttcgtcgaa
ttcgcagatttaaatcaggctatatcaatggtttcatattatgcatcatcttcagagcct
gcacaagttcgtggcaaaactgtgtatattcaatattcaaatagacatgaaattgtgaac
aacaaaagtccgggagatgttcctggaaatgtcttgcttgttaccatcgagggcgtagaa
gctggcgatgttagcattgatgtgattcacttggtcttttctgcttttggctttgtgcat
aaaattgctacctttgaaaaggctgcaggtttccaggcattaatccagttcagcgatgct
gagactgcatctgcagctaggaatgccttaaatgaaagaagcatacccaggtatttgctt
ccagagcatgttaattcatgtcacttgcgtatttcatattcggcacacactgatctgaac
attaagttccagtctcacagaagcagggactatacgaatccatacttacccgttaatcct
actgcaattgatggaattgctcagcctgctttagggcctgatggaaaaaggaaagaacct
gagagtaatgttcttcttgcctcaatagataatatgcagtatgctgtcactgtggatgtt
cttcacacggttttctctgcattcggtaccgtccagaaaattgctatatttgagaagaat
ggtcaaacccaggcacttatccaatatcctgatattagcactgcagcagttgccagggag
gctttagagggacattgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtaaaggcttacagtgataaaagtagagattatacaatccca
gatgcgagtttgcttgcagcacaaccagtgtcaggtctccctggtgctccagcagcttgg
caaaatcctcaggctggtccaatctatcctggaaatgattttactgctggaggtgctgcg
ccacctcactatcctggtggacagatggctccatgggatcccaccatgcaggctggcaga
acttcatatggctcggttgctagcacttatcctggtcaaccttttgcagcctcggttcct
gcatatgcgactgcaccactcacaccaaccggccaaattcctactactgtcacttcaatg
ggattttctccgacggttccaacgaatgtgcgacctggtgatgcttcacctcgtggtcag
catacatactatggtcaatag
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