Juglans regia (English walnut): 108986366
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Entry
108986366 CDS
T05245
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jre03016
]
108986366
Transfer RNA biogenesis [BR:
jre03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
108986366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
Beta-prop_WDR19_1st
WD40_WDHD1_1st
New_glue
TPR_GEMI5
Beta-prop_EML_2
DUF2982
PhyR_sigma2
Beta-prop_IFT122_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
108986366
NCBI-ProteinID:
XP_018814520
UniProt:
A0A834CT01
A0A2I4E551
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All DBs
Position
7:complement(50147885..50153099)
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AA seq
1311 aa
AA seq
DB search
MNNLKLYSELSSKLELESKEEDESVLLSAFDIEQSRLFFASSANRIYTTHLSSFHNERAW
SLSADVDSIDLEPNDYITALEYLMEKEALVIGTFDGLLLLHGVDGNETTMVGRVEGGVRC
ISPSPDGDVLAVISRLGQIMVMTHDWDLLYETALEVVPEGVDVREPTYSRYESPISWRGD
GKYFVTLSEVCDSITLLKRIKVWERDSGALHATSESKAFMGSVIEWMPSGAKIAAVCDRK
TDNECPSIVFFERNGLERSSFSINEQIDSTIDILRWNCTSDLLAAIVRCEKHDAVKIWLF
SNNHWYLKHEIRYSKKDGVKFMWDPTKPMQLICWTLGGHITLYNFVWNTAVTENSISLVV
DDSKIFVTPLALSLMPPPMYLFNLKFPTAVREISLYSKNTKNCLAAFLSDGCLCVVELPT
VDTWDELEGKQFIVEASISESVFGSIVHLIWLDSHILLAVSRYGFDHYLSKTSSNEDGLL
GFYLQEIELSCSEDHVPGLLTCSGWHAKISHQNSLEGQVIGIAPNPTKRCSAYIQFDGGK
IFEYTSRIGALKHNDLSFLSSCPWMSVVSVVDGGSLKPLLFGLNDIGRLSVGGRILCSNC
SSFSLYSNLADQVITHLILATKQDLLYIVGINDILHGKLEMYEDFIHTGNRRREEIKTFI
NIWERSAKIVGVLHGDEAAIILQTTRGNMECIYPRKLVLASIVNALVQERFRDALLMVRR
HRIDFNVIVDHCGWQAFLQSAAEFVRQTNNLSHITEFVCAINNENVTEGLYGDIISLPCS
KDIKDLKARDPKGLDVNNKGSSVLLAIRKALEEQLPESPARELCILTTLARSDPPLLEEA
LARIKVTREMELSSSNDPKRRSYPSAEEALKHLLWLSDSEAVFEAALGLYDLNLAAIVAL
NSQRDPKEFLPFLQELEHMPVLLMRYNIDLRLRRYANALKHIVSAGDAHYDDFMNLMKKN
PQLFPLGLQLINDPAKRKQVLEAWGDHLSGEKCFEDAAITYLCCFSLEKALKSYRACGNW
SGVLTVAGLLEMGKDEVMQLARELSEELQALGKPGEAAKIALEYCGDVNEGINLLISARD
WEEALRVAFLHRREDLILEVKNASLECASMLIGEYEESLEKVGKYLARYLAVRQRRLLLA
AKLQTEERSTSDLDDDTASEASSNFSGMSAYTTRTRKTTTSSIISSAASKARDMRQQRKR
GKIRPGSPGEEMALVEHLKGMALTAGAKHELKSLLGSLVMTSEETTARKLQHTAENFQIS
QMAAVQLAEDAMPSDNINEQAHTLELYIQRVKSEAQNSEAFFWRSKIFLSP
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatctgaagctttactcggagctctcttcgaagctcgagctagagtcgaaggaa
gaagacgaatccgtactattatcggccttcgatatcgagcagagccgcttgttctttgct
tcttctgccaaccgtatttacaccactcatctctcctcattccataatgaaagggcgtgg
agcttatctgcggacgtggattccatcgacttggagcccaatgactacatcaccgccttg
gagtatctgatggagaaagaggcgctggtaatagggacttttgatgggcttttgttgctg
catggtgtggatggaaatgaaaccaccatggttggcagagtggagggtggggttaggtgc
atctcacccagtcctgacggggatgtgcttgctgtaataagtcgtctggggcagataatg
gttatgactcatgattgggatttgctttatgagactgcactggaggttgttcctgaaggt
gttgacgtacgtgaacccacctattctagatatgagagtcccatttcttggcgaggtgat
gggaagtactttgtgacactgagtgaagtttgtgattctattaccttgcttaagaggatt
aaggtatgggaacgagattcaggggcattgcatgctacttcagaatcaaaggcatttatg
ggatcagtaattgaatggatgccaagtggagcaaaaattgcggctgtttgtgacaggaaa
acagataatgagtgcccatcaatagttttctttgagaggaatgggttagaaagaagctca
ttcagcatcaatgagcaaattgattcaacaatagacattctgaggtggaattgcacatca
gatcttcttgcagctattgtcagatgtgagaaacatgatgctgtaaagatctggttgttc
agcaataatcattggtacttaaagcatgaaattaggtactctaagaaggatggagtgaag
ttcatgtgggacccgacaaaaccaatgcagttgatttgttggactcttggggggcatatc
acactttacaacttcgtctggaatacggctgtcacagagaactcaatatcattagttgtt
gatgattccaagatttttgtgactccccttgctttgtctcttatgccacctcctatgtat
ctattcaatctgaaattcccgactgctgtccgggagatatctttatattccaagaatact
aagaactgtttggctgcttttctatcagatggttgtttgtgtgtcgtagagctccccaca
gttgatacttgggatgaacttgaaggcaaacaatttattgttgaagcctccatatctgaa
tctgtgtttggatctattgtgcatcttatatggttggattcgcatatactgcttgctgtt
tcccgttatggttttgatcactacttgtccaaaacttcatcaaatgaggatgggcttctt
ggcttttatttgcaggaaattgagctttcatgctctgaggatcatgtcccaggtttgctg
acatgctcaggctggcatgcaaaaatttcccatcaaaactctctggaagggcaggttatc
ggtattgctcccaaccccaccaaaagatgttcagcttatattcagtttgatggaggaaaa
atttttgagtatacgagtaggataggagccctgaaacataatgatttgagtttcttatca
tcttgcccttggatgagtgtggtttcagttgttgatggtggatcattgaagcctttgctt
tttggactcaatgacattggcaggttgagtgttggtgggaggatattgtgcagcaactgc
agcagtttttcattgtactccaatttggctgatcaagtgatcacgcatttaattcttgcc
actaaacaggatttgctctacatagttggcattaatgatatcttgcatggaaaattagaa
atgtatgaggatttcatccacaccggtaacaggagaagagaggaaattaaaacgtttata
aatatatgggaaagaagtgccaaaattgttggcgtcctgcatggagatgaagctgctatc
atattacaaacaactaggggaaatatggaatgtatctaccctagaaaattagtcctggcc
tctatcgtcaatgcattggtccaagaacgcttcagagatgcactactcatggtgaggcgg
cataggatagatttcaatgtcattgttgatcattgtggttggcaagcattcctccaatca
gctgcagagtttgttaggcagactaacaatttgagccacataactgagtttgtttgtgcc
ataaacaatgagaatgtcacagagggactgtacggagatatcatatccttaccttgctca
aaggacatcaaagatctgaaagctagagacccgaaaggtcttgatgtcaataacaagggt
tcttctgttctgctggccataaggaaggctcttgaagaacaactaccagaaagccctgca
agggagctttgtatcttgactactcttgctcgtagtgatcccccattgcttgaagaagct
ttggcgagaataaaagttactcgtgaaatggaattatcaagttcgaatgaccctaaaaga
aggtcttacccttctgctgaagaagctttgaagcatctcttgtggttatctgattccgag
gctgtgtttgaggctgctttaggcctttatgatttgaaccttgctgctatagtagcattg
aactcacagcgagatccaaaagaatttcttcctttccttcaagagttggaacacatgcca
gttctcttaatgcgctacaatattgaccttaggctgcgcaggtatgcgaatgctctcaaa
catatcgtttctgcaggagatgctcattatgacgattttatgaacctcatgaagaaaaat
cctcaactttttcctttgggacttcaacttatcaatgatcctgccaagaggaagcaagtc
ctcgaggcatggggagatcatcttagtggggaaaaatgtttcgaggatgcagctataact
tatttgtgctgtttcagtttggaaaaggctttaaagtcatatcgtgcttgtggtaattgg
agtggtgtgcttacagtggctgggctccttgagatgggaaaagatgaggtcatgcaactg
gctcgtgagctttctgaagaacttcaagctcttggtaaaccaggggaagctgccaaaatt
gctctggagtattgtggagatgtaaatgagggcattaatttgttaattagtgcaagagac
tgggaggaagctttgagggttgcatttttgcacaggagagaggatttgatcttggaagtg
aagaatgcatctttggaatgtgcaagcatgctgataggagaatacgaggaaagtttggaa
aaagtagggaagtatctggcccgctacttagctgttcgacagagaagattacttcttgct
gcaaagctgcagacagaggaacggtcaacgagtgatcttgatgatgatactgcttcagag
gctagcagtaatttcagtggaatgagtgcttacaccacaaggaccaggaagaccaccacg
tcttccatcatctcaagtgcggcaagcaaggccagagacatgagacaacagagaaagaga
ggaaaaatccgtcctggaagccctggtgaggagatggctctggtggagcatttgaaaggc
atggctctaacagctggagcgaagcatgaactcaaatctttactgggatcccttgtaatg
accagtgaggaaacaactgcaaggaagctgcaacacaccgcagagaactttcaaatatct
caaatggcagcagttcagctagctgaagatgctatgccgagtgataacataaatgagcaa
gcacatactttggagctctacatacaaagagtgaaaagtgaagcgcaaaattcagaggcc
ttcttttggcggtctaaaatattcctctctccttga
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integrated database retrieval system
