Juglans regia (English walnut): 108986608
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Entry
108986608 CDS
T05245
Name
(RefSeq) serine/arginine-rich splicing factor RS31 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
jre
Juglans regia (English walnut)
Pathway
jre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108986608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
108986608
Spliceosome [BR:
jre03041
]
Common components
Common spliceosomal components
SR proteins
108986608
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
SET_assoc
RRM_5
RNA_bind
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
108986608
NCBI-ProteinID:
XP_018814829
UniProt:
A0A2I4E606
LinkDB
All DBs
Position
7:complement(11412844..11415826)
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AA seq
252 aa
AA seq
DB search
MRPVFVGNFEYDTRQSELERLFGKYGKIERVDMKSGFAFVYFMDERDAEDAIRGLDNRPF
GFDRRRLSVEWARGERGRPRDGSRSVANQRPTKTLFIINFDPIRTTVRDIERHFEPYGRI
LHVRIRRNFAFVQFETQEDATKALECTHMSKLLDRVVSVEYALRDDDESGDSHHDSPRKR
GYSGRGVSPYKRSPSPVYQRRRSPDYGRPGSPVYDRYNGPAYDRRRSPDYGRNRSPEYGR
FRSRSPIRRSGT
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaggccggttttcgtgggtaacttcgagtacgatactcgccaatctgaactggagcgt
ttgtttggaaaatacgggaagatcgagcgtgtggacatgaaatctggttttgcttttgtt
tatttcatggatgagcgtgatgctgaagatgccattcgtggccttgataataggccattt
ggttttgacaggcgtaggttgtcagtggagtgggctaggggggaacgtggtcggcctcgt
gatggatctaggtctgtggcaaaccaaaggcctactaaaaccttgttcataattaacttt
gatccaatacgcacaactgtgcgtgatatagaaaggcactttgaaccttacggaaggatt
cttcatgttcgaattcgacggaactttgcatttgttcagtttgagactcaggaagatgct
accaaagcactcgagtgtactcacatgagcaagcttttagacagagtagtatctgttgag
tacgctttaagggatgacgatgagagcggtgacagccatcacgatagccctagaaaaaga
ggttatagtgggcgtggggttagtccttacaaaaggtcaccaagtccagtgtatcaaaga
cgccggagtcctgattatggtcgtccaggtagccctgtttatgataggtacaatggtcca
gcatatgacaggcgcaggagtcctgattatggcaggaacaggagtcctgaatatggccga
ttccggagccgatcgcctatacgaaggtcaggaacttga
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