Juglans regia (English walnut): 108986774
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Entry
108986774 CDS
T05245
Name
(RefSeq) RNA-binding protein 25-like isoform X1
KO
K12822
RNA-binding protein 25
Organism
jre
Juglans regia (English walnut)
Pathway
jre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108986774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
108986774
Spliceosome [BR:
jre03041
]
Complex A
U1 snRNP components
U1 related factors
108986774
Complex B
108986774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Tsp45I
Motif
Other DBs
NCBI-GeneID:
108986774
NCBI-ProteinID:
XP_018815061
UniProt:
A0A2I4E6N3
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All DBs
Position
16:17956653..17966580
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AA seq
956 aa
AA seq
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MADPPATPEPNHSQPEPDTPNPLSSQPDSAPASSPPQPQLSIPSSPPITAKPTSNTPALA
SAFPPPPPPPPPSLPMVSYAPTHVSGGAMAPSFRPVPQFLSMPSPGLTNPNYQNPGGVHP
PGVSMAVSGGVGAGPMSVPQPMLPYQFPPGHHPRPYPPPMPNGYPAVPPGTIPPPGLSRY
PSPYTPMVRSPFPPRSPGVINGLPAVSRPAIPGVPRVPCPIIPPVVMPIISMVTPAEKPQ
TTVYVGKIASTVENDFILSLLQLCGPIKSWKRAQDPTDGTPKGFGFCEFESAEGVLRALR
QLSKFNIDGQELVLNVNQATKEYLERYVDKQTEISKKRKDAQAAEPEEGEETAVNVGENE
HLKFSVEDSNKEESGLGNKENNDFASFGIVTNEDKEADRVALEKLTSMIEERLKTRPLPP
PPPHPQATGDGPGNSKSDVPAKSRDGDSEMRNDAAEDKNDDEITSETKMASEHDRPETSS
PDRSRRYDRRSRDRDRERDLKREKEQEIERYERGTQRERVRKEREQRRKIEEAERQYEEC
LKEWEYREREIEKQRQYEREREKERERKRMKEIKTDEDDEDGDSRRRWHRNMLENKRKRR
LWEKEDDLANRYNEEEEIAKAKRRAEEQQEKQQKDALKVLSNNVTNKIAKTVLTEASSTE
IKDNILEEGYEGASACESHIGESIVQNGTGEESTISSIAASDTQHAGNAPAKKLGFGLVG
SGKRTGVPSVFHEEDDDARKEKKMRPLVPIDYSTEELEAVQPIIPGALSPNLAAAAEFAK
CISNVNPKDDKPDVEREISRRFNHKLSQRGRDQGDENVNHTRVDNKEKILDREQGLDKMN
TPDNKKLTSLKQLIDMIPRTKEELFSHEINWAVYDKHGLHERMRPWISKKIAEFLGEEET
TLVDYIVSSTQEHVKASQMLELLHSILDDEAEMFVLKMWRMLIYEIKRVEAGLASK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccctcctgcaaccccagaacccaatcattcacaacccgaacccgacaccccc
aatcccttatcaagccaacccgactcggcgcccgcctcctcaccaccacaaccgcaattg
tcgattccgtcgtccccacctatcactgctaaacctacttcaaacactcccgctctagcc
tctgcgtttccaccgccgccgcctccaccgcctccatcgttgcctatggtctcctatgcg
ccgactcatgtctccggcggagccatggcaccttcattccggccggtcccgcagttcttg
tctatgccgagtcccggtttgactaaccccaattaccagaaccctggcggggttcatccc
cctggtgtgagcatggcggtgagtggtggcgttggggcgggtccgatgtctgtgccgcag
ccgatgctgccttatcagtttccgccgggtcatcatccgagaccctacccgccgccgatg
ccaaatgggtacccagcggttcctccgggtactatacctcctcccggactttctcgttat
ccatctccatacacacctatggttcgttctccatttcctccacgctctccaggagtgatt
aatggccttccagcagtgtcacgccccgcaattccaggggttcctagagttccttgcccc
attataccccctgttgttatgccaattatttctatggttacaccagctgagaaaccacaa
acaacagtttacgttggtaagattgcatcaacagtggaaaatgattttatcctgtctctc
cttcagctttgtggacccatcaaaagttggaaacgtgctcaagatcccacagacgggact
cctaaaggatttgggttctgtgaatttgagtctgctgagggggttcttcgtgcattgcgt
caacttagtaaatttaatattgatgggcaagaattggtgttaaatgttaatcaagcaaca
aaagaatatctggaacggtatgttgataaacaaactgaaatctcaaagaaacgtaaagat
gcccaagctgcagagcccgaggaaggggaagaaactgcagtaaatgtcggggagaatgaa
catctgaagttctctgtagaggactcaaataaagaggaaagtggtttggggaacaaggaa
aataatgattttgctagttttggaattgtaactaatgaggacaaggaagctgaccgagtg
gctttggagaagcttacaagcatgatagaggagagactaaagaccagacctctgcctcct
ccccctccccatccacaagcaactggtgacggccctgggaattcaaaatcagatgtacct
gctaaatcaagggatggagactctgaaatgagaaacgatgcagctgaagataaaaatgat
gatgagataactagtgaaaccaaaatggctagtgagcatgataggcctgaaacaagttca
cctgataggagtagaaggtatgataggagaagcagagatagagaccgagagcgggatttg
aaaagggagaaggagcaggagattgaaagatatgaaagaggaacacagcgagagcgagtt
aggaaagaaagggagcaaagaagaaaaattgaggaggctgagcgtcagtatgaagagtgt
cttaaagagtgggagtatagagaaagagagatagagaaacagcggcagtatgagagggaa
agggaaaaagagagggaacgtaaacggatgaaggagataaaaactgatgaagatgatgag
gatggtgattcgagaagaaggtggcaccggaatatgttagagaacaagagaaagaggagg
ctatgggaaaaggaagatgacttggccaataggtataatgaagaggaagaaattgctaag
gcaaagaggagagctgaggaacagcaagagaagcaacagaaggatgcattgaaggtcttg
tccaataatgtaacaaataaaattgcaaaaactgtgttgactgaagcatccagtactgaa
ataaaagataatattcttgaagagggttatgaaggtgcttctgcttgcgagagccatata
ggtgaatcgattgtacagaatggtactggtgaagaatcaaccatatcgtcaattgctgca
tcagatacacagcatgctggcaatgcccctgcaaagaagttggggtttggtttagttggc
tctggaaaacgaactggtgtcccttctgttttccacgaggaggatgatgatgcacgtaaa
gaaaaaaagatgaggccccttgtcccgattgattactcaactgaggaactggaggctgtc
caacctatcattcctggggcactgtcgccaaatttggctgcagcagcagaatttgcaaag
tgcatatcaaatgttaatcccaaagacgataagcctgatgtagaaagggaaataagtaga
cgttttaatcacaagttgagccagcggggtagggaccagggtgatgagaatgtgaatcac
accagagttgacaacaaggagaagattcttgaccgggagcaagggctggataaaatgaat
acaccagataacaagaagcttacgagtttaaagcagttgatagatatgataccaaggacc
aaggaagagttattctcacatgagattaactgggccgtgtatgacaagcatgggctgcat
gaaagaatgagaccatggatttcgaagaagattgctgagtttttaggagaggaagaaacc
acactggtagattacattgtatccagtactcaagaacatgtgaaagcatctcaaatgctg
gaactgctacattctattttagatgatgaagccgaaatgtttgttctcaaaatgtggagg
atgctcatatatgaaattaagagggtagaggcaggccttgcttcaaagtga
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