Juglans regia (English walnut): 108986986
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Entry
108986986 CDS
T05245
Name
(RefSeq) squalene synthase 2
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre00100
Steroid biosynthesis
jre00909
Sesquiterpenoid and triterpenoid biosynthesis
jre01100
Metabolic pathways
jre01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
108986986
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
108986986
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
jre01006
]
108986986
Enzymes [BR:
jre01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
108986986
Prenyltransferases [BR:
jre01006
]
Terpene biosynthesis
Squalene/phytoene synthase
108986986
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF2172
PhoU_div
Motif
Other DBs
NCBI-GeneID:
108986986
NCBI-ProteinID:
XP_018815354
UniProt:
A0A2I4E7I3
A0A833TXU9
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Position
13:5759822..5766037
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AA seq
414 aa
AA seq
DB search
MGSLGAVLKNPDDFYPLLKLKMAARHAEKQIPPEPHWAFCYTMLHKVSRSFALVIQQLTP
ELRNAVCIFYLVLRALDTVEDDTSIQTDVKVPILIAFHRHIYDREWHFSCGTKEYKVLMD
EFHHVSTAFLELGKSYQEAIEDITKRMGAGMAKFICKEVESIDDYDEYCHYVAGLVGLGL
SKLFHASGSEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKL
EDLKYEENSEKAVQCLNDMVSNALTHVEDCLKYMAALRDLSIFRFCAIPQIMAIGTLALC
YNNIEVFRGVVKMRRGLTAKVIYRTKTMADVYGAFFDFSCMLKSKVNKNDPNATKTLSRL
DAIQKICRNSGVLNKRKSYVVRSEPRLNPTLVVMLFIILSIIFAYLLSAKRPNN
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggggagcttgggtgcggttctgaaaaaccccgatgacttttacccgctgctgaagctg
aaaatggcggccaggcatgctgagaagcagatccctccggagccacactgggctttctgc
tacaccatgcttcacaaggtctctcgcagcttcgctctcgttattcagcagctcaccccc
gaacttcgcaacgccgtatgcatattttatctggttcttcgagcccttgatactgttgag
gatgatacaagcatacaaacagatgttaaagtgcctatccttatagcttttcatcgtcac
atatatgatcgtgagtggcatttttcatgtggtacaaaggagtacaaagttctcatggac
gaatttcatcatgtatcaactgcttttcttgagcttggaaagagttatcaggaggcaatt
gaagatattaccaaaagaatgggtgcaggaatggcaaaatttatatgcaaggaggtagag
tcaattgatgactatgatgaatattgccactatgtagcaggacttgttggactaggtctg
tccaagcttttccatgcctctgggtcagaagatttggctccagatcatctttcgaattca
atgggtttatttcttcagaaaacaaacataatacgagattatctggaggatattaatgag
ataccaaagtctcgcatgttttggcctcgcgagatctggagtaaatacgttaacaaactt
gaggacttgaaatatgaggaaaactctgaaaaggcagtgcaatgtttgaatgacatggtc
agcaatgctttgacacatgtggaagattgcttgaaatacatggctgccttacgtgatctc
tcgatattccgattttgtgctatcccccagatcatggccattggaacactggcgttgtgc
tacaacaacattgaagtcttcagaggtgtagttaaaatgaggcgtggtcttactgccaaa
gtcatctaccgaacaaaaacgatggctgatgtatatggtgctttctttgatttttcttgt
atgctgaagtcaaaggtcaacaagaatgaccctaatgcaacaaaaacgttgagcaggctg
gatgcgatacagaaaatctgcaggaattctggagtccttaacaaaagaaaatcttacgtc
gtcaggagcgagcctagattaaatccgactcttgttgttatgctgttcattatattgtcc
atcatttttgcatatctcctctctgccaaacgaccaaataattga
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