Juglans regia (English walnut): 108986999
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Entry
108986999 CDS
T05245
Name
(RefSeq) protein CHROMATIN REMODELING 35-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108986999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jre03400
]
108986999
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
108986999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_16
Motif
Other DBs
NCBI-GeneID:
108986999
NCBI-ProteinID:
XP_018815369
UniProt:
A0A2I4E7K7
A0A833TYM3
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All DBs
Position
13:5569599..5576927
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AA seq
905 aa
AA seq
DB search
MEPMVEVFPSNHTTMSVHASQSVSRSGFYQTGYKRLKFSDSVNECGNMAVSASMPNDIEQ
KKPKTSPEVIDYRDPFAIPNLLESLDSGKYGSVTKDIEALIARKMQMLHPYYAKYPKLSN
TFLEAEEKPSNGALKHTTHLSDNNVIDLEDDNIANNVKAVAPPVVVIDSDEEDNVHKKTF
VPFQEIVLPRPAGQFLMKDFLDFRVPLGHARKGGAQREEAIAELKIKKEKGVYVGVEDED
SHQIDPEDDGLEDMWKEMTMALECSKDVALDPSSDEQLKEGGEYCDHSFVLKDDLGYVCR
ICGVIDREIETIFEFQYNKVKRSTRTYMPDSRNAKDKDSTDIFRVKLSEDDQMVTEIFAH
PRHTKQMKPHQVEGFDFLVSNLVGDSPRGCILAHAPGSGKTFMIISFMQSFLGKYPHARP
LVVLPKGILATWKKEFQTWQVEDIPLYDFYTVKADNRSQQLEVLKQWVEHKSILFLGYKQ
FSAIVCDNVTSKTSASCQEILLKAPSILVLDEGHTPRNENTDVLQSLAKVQTPRKVVLSG
TLYQNHVKEVFNILNLVRPKFLRSETSRAVVKRIMSRVDIPGIRRPFKAGADAAFYDLVE
HTLQKDKDFRRKVAVIRDLREMTSTVLHYYKGDFLDELPGLVDFTVVLNLSSRQKHEVSN
YVKKLAMKFKISSVGSAVYLHPKLNSFSDNHATADHLVDEMLEKIDVKDGVKAKFFLNML
SLCESAGEKLLVFSQYLLPLKFLERLAVKLKGWSPGREIFMISGESSSDQREWSMERFNN
SSDAKVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQKKRVFAYRLV
AADSPEEEDHSTCFKKELISKMWFEWNEYCGYRDFEMETVGVKECDDIFLESSLLGEDVK
VLYRR
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggagccaatggttgaagtgtttccgagtaatcacaccactatgagtgttcatgcatcg
caatctgtttcgagatcagggttttaccaaacgggatataaaagactgaagttttcggat
agtgtaaatgagtgtggaaacatggctgtctctgcaagcatgcctaatgatattgaacag
aagaaaccaaagacctccccagaagttattgattaccgcgatccttttgctatccctaac
ttgctggaaagcttagactctggtaaatatggaagtgttacaaaagatatagaagccctc
attgctcgaaagatgcagatgctgcacccttactatgcaaagtatcccaaactttcaaat
acattcttggaagcagaagagaaacctagtaatggggctttgaaacacactactcacttg
tcagataataatgtcattgatttggaggatgacaacattgcaaataatgttaaagctgta
gcaccgcctgttgtagttattgactcagacgaggaagacaatgtacataagaagactttt
gttccttttcaggagattgtcttgccaagaccagctggacaatttctcatgaaggacttt
ttggatttccgtgttcctcttggtcatgccagaaagggtggagcgcagcgagaagaagca
attgctgaacttaaaatcaagaaagaaaagggtgtttatgttggtgtagaagatgaagac
agtcatcagattgatcctgaagatgatggtctggaagatatgtggaaggagatgacgatg
gcactagaatgttcaaaggatgtcgctctagacccttcatctgatgaacaattgaaggaa
ggaggggaatactgtgatcattcttttgtcttaaaggatgatcttggctatgtttgccgc
atttgtggcgttatagacagagaaattgagaccatatttgagttccagtacaataaggtc
aaaaggagtacccgaacttacatgcccgattctcggaatgccaaagacaaagactcaact
gatatattcagagttaaactttctgaagatgatcagatggtaactgaaatatttgcccat
cctaggcatacaaagcaaatgaaacctcatcaagtagagggtttcgattttcttgtcagc
aacttggtgggtgatagtcctcgaggctgcatcttggcccatgctcccggatctgggaag
acatttatgataatcagttttatgcaaagtttcctgggaaagtatccacatgctagacca
ctggttgtgctccctaaaggaatcttggctacgtggaaaaaggagttccagacatggcaa
gtagaggatattccactgtatgacttttacactgtcaaggctgataatcggtctcagcaa
cttgaggtgttgaaacagtgggtagagcataagagtatccttttcttgggttataaacaa
ttctcagcaattgtttgcgacaatgtaacaagcaagacctctgcctcatgtcaagagata
cttcttaaggctccttcaattcttgttctggatgaagggcacactccacgaaacgagaac
actgacgtgttacagtcccttgcgaaggtgcagacacccagaaaagttgtactttcagga
accctgtaccaaaatcatgtcaaagaggtgttcaatattttgaatcttgtccgaccaaag
tttttgcggtcggaaacctctcgagctgttgtcaagcgcatcatgagtagagtagatata
ccaggcatcagaagaccgttcaaagcaggtgctgatgcagctttctatgacttggttgaa
cacactttacagaaggacaaagattttaggcggaaagtggccgtcatacgagatttgcgc
gagatgactagcacggtccttcactattataaaggggacttcttggacgagcttccaggt
cttgttgatttcactgtggtactgaatttaagctccagacagaagcatgaagtttcaaat
tatgtaaaaaagttggcgatgaagttcaagataagttcagttgggagtgctgtctatctt
cacccaaagctgaattctttctctgataatcatgctactgctgatcatctggtggatgag
atgttagagaaaatagatgtaaaagatggagtgaaggcaaaattctttctcaatatgctt
agcttatgtgagtcagctggagagaagctgctggttttcagtcagtacctcctacccttg
aaatttctagagcgattagcagtgaagttgaagggctggagtcctggaagagaaatcttt
atgatttcaggcgaatcaagttctgaccaacgtgaatggtccatggaacgcttcaataat
tcttctgatgccaaagtcttctttggctccatcaaggcatgtggggagggtatatctttg
gttggggcatcccgcataataattctggacgttcatctgaatccatcggtgacccgccaa
gcgataggtcgtgcatttcgaccaggtcaaaagaagagagtttttgcatatcgattggta
gctgctgattcacccgaagaggaagatcacagcacttgcttcaagaaggaattaatttcg
aagatgtggtttgaatggaatgagtattgtggttatcgagattttgaaatggagacagtt
ggcgtgaaagagtgtgatgatatcttcttggaaagttcactgttaggggaagatgtaaag
gttctgtacagaaggtag
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