Juglans regia (English walnut): 108987046
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Entry
108987046 CDS
T05245
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre00040
Pentose and glucuronate interconversions
jre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108987046
Enzymes [BR:
jre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
108987046
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
108987046
NCBI-ProteinID:
XP_018815435
UniProt:
A0A2I4E7R8
A0A833Y671
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Position
2:16859640..16861321
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AA seq
404 aa
AA seq
DB search
MAIPLIRLSLLALLATASSISSPPVQDPELVVQEVNKNISTASRRKLAYLSCATGNPIDD
CWRCDPKWEQNRKRLADCAIGFGKRAIGGKNGKIYVVTDAGNDDPVNPKPGTLRHAVIQD
RPLWIIFKRDMVIKLKQELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINVHDC
KQGGNAYVRDSPSHYGWRTKSDGDGISIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITI
SNNYMIHHDKVMLLGHSDSYKQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYSH
WIKYAIGGSAAPTINSQGNRFLAPNSRYNKEVTKHENAPQSVWKNWNWRSKGDLLLNGAF
FTPSGAGASSSYAKASSLSAKSSSLVSAITAGAGALKCKKGSYC
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcaattccactcattcgtttaagccttttggctcttctagctacagcctcttctata
tcctccccgcccgttcaagatccagaactagtagtgcaagaagtgaataagaacatcagc
accgcctcaaggagaaaattagcctatctgtcttgtgcgacagggaatcccattgatgat
tgctggaggtgcgacccaaaatgggagcagaacaggaaacggcttgcggattgtgctatt
ggatttggaaagcgtgcaatcggcggcaagaacggcaaaatatatgtggtcacggatgcc
ggaaatgatgaccctgtgaaccccaagccaggcactctgaggcacgccgtgatccaagat
cggcctctgtggatcattttcaagcgtgacatggtgatcaagctgaagcaagagctgatt
atgaattcgttcaagacgatcgatggccgtggcgcaagcgtgcacattgccgggggacca
tgcattactattcagtacgtgaccaacattatcattcatggcatcaacgttcatgactgc
aagcaaggtgggaatgcttacgtgagggactctccaagccattatggctggaggactaag
tcggacggcgatggcatctcgatcttcggtggaagccatgtttgggtggatcattgctct
ctgtctaattgccgtgatggtttaattgatgccattcatggatctacagccatcaccatc
tccaacaattacatgatccaccatgacaaggtcatgctcttgggtcacagtgattcctat
aaacaagacaaaaatatgcaagtcactatagccttcaaccattttggagaagggcttgtg
caaaggatgccaaggtgtagacatggttatttccatgtggttaacaatgactactcccat
tggataaagtatgcaatcggtggcagtgccgctccaactattaacagccaaggaaacaga
tttcttgctcctaatagcagatataacaaggaggttaccaaacacgagaatgcaccacag
agcgtgtggaagaattggaactggagatccaaaggagatttgctattgaatggggctttc
ttcactccctcaggggctggagcatcttcaagttacgccaaggcatcaagcttgagtgca
aaatcatcttcgctcgtgagtgcaatcacagccggagcgggtgcactcaagtgcaagaag
ggctcgtattgctga
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