Juglans regia (English walnut): 108987200
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Entry
108987200 CDS
T05245
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre00040
Pentose and glucuronate interconversions
jre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108987200
Enzymes [BR:
jre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
108987200
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
108987200
NCBI-ProteinID:
XP_018815624
UniProt:
A0A2I4E8A3
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Position
3:complement(24923418..24928216)
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AA seq
478 aa
AA seq
DB search
MLQSTCIVLISLMCTFSRFGRAKLNFTLPGQHPNPEAVVQEVHRRVNASVNYRRSMLQVS
QQDQSSCLTGNPIDDCWKCDPDWPNNRQRLADCAIGFGQYSMGGKNGEFYIVTDSTDDDP
VNPRPGTLRYAVIQTEPLWIVFPSNMLIKLSQELIFNSYKTLDGRGANVHIVGGGCITLQ
FISNVIIHNIHIHHCHPSGETNVRSSPTHYGWRTKSDGDGISIFGSKDIWIDHCSLSHCK
DGLIDAVEGSTGITISNNYFSNHDEVMLLGASDDYLPDSGMQVTIAFNHFGEKLVQRMPR
CRRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPSNHNAKEVTKRVDTAEGEWRG
WNWRSEGDIMVNGAFFVASGEGVEVKYEKAYSVEPKSAVLIDQLIMHAGVLGVGGRENNL
GMWTKGSEGGGNGFGSDPDYTDDFSRSSVLLSPFTFVLVSPLIAFSCLLFYKVHPSFL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaagtacctgcattgtcctgatctctcttatgtgcacattttctcggtttggt
agagcgaagctcaacttcactcttcccggccagcatcccaaccccgaagctgttgtccaa
gaagttcacaggagggtaaatgcttctgtaaattatagaaggagcatgctacaagtatcc
cagcaagaccagtcttcatgcctaactggaaaccccatagatgactgctggaaatgtgac
ccagactggcccaacaaccgacagagactagcagattgcgccattgggttcggacagtac
tctatggggggcaaaaatggagaattctatattgtcaccgactccacagacgatgatcct
gtcaatcctaggccagggactctacgttatgctgtgatccaaactgaacctttgtggatc
gtgttccccagcaacatgctcataaaactctcccaggagctcatctttaatagctataaa
actctcgacgggcgtggggctaatgttcacatcgtgggtggaggctgcattactcttcag
ttcataagcaatgtcatcattcacaacatacatatccaccattgtcatccctcaggtgag
actaatgtgcggtcgagtccaacccactatggttggcgcacaaaatccgacggtgatggg
atatcgatatttgggtcgaaagacatatggatagaccattgctctctgtcgcactgcaag
gacggcttgattgacgctgtggaggggtccactgggatcacgatatcgaataactatttc
tcgaatcacgacgaggtgatgctgctgggcgccagcgacgactacttgcctgactcggga
atgcaggtgactattgccttcaatcattttggtgagaagctggtgcagaggatgcccagg
tgcaggcgcggctatatccacgtcgtcaacaacgatttcacgcagtgggagatgtatgct
attggtggtagcggtaacccaaccatcaatagccaaggcaaccgctacactgctccttcc
aaccacaatgccaaagaggtaacgaagcgagttgatacagctgaaggggaatggagggga
tggaattggaggtctgaaggggatataatggtaaatggagcattctttgtggcgtcgggt
gagggtgttgaggttaagtacgagaaggcctatagcgttgagcccaaatctgctgttctc
attgatcagctcatcatgcacgccggtgtacttggcgttggtggcagggagaacaatttg
ggaatgtggaccaaaggaagcgagggtggtggcaacggttttgggtcagacccagattat
acagatgatttttcaaggagcagcgtgctattgtcaccttttacttttgttctcgtatct
cctttgattgcattttcatgcttgttattttataaagtacatccatcatttttgtaa
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