Juglans regia (English walnut): 108987398
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Entry
108987398 CDS
T05245
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre04120
Ubiquitin mediated proteolysis
jre04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108987398
04120 Ubiquitin mediated proteolysis
108987398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jre04121
]
108987398
Enzymes [BR:
jre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108987398
Ubiquitin system [BR:
jre04121
]
Ubiquitin ligases (E3)
U-box type E3
108987398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
108987398
NCBI-ProteinID:
XP_018815848
UniProt:
A0A2I4E8W8
A0A833YEE6
LinkDB
All DBs
Position
1:8031478..8043984
Genome browser
AA seq
1042 aa
AA seq
DB search
MAAPKPQKRSLEEIEDIILRKVFLVSLTDTVELSSDSRIVYLEMTAAEVLSEGKELRLSR
DLMERVLIDRLSGNFSSAEQPFQYLVGCYRRAFDEGKKIASMKDKGVKSEMESVVKQAKK
LSVSYCRIHLGNPELFPNPLNSNEKSRSSKSPLLPLIFSEVGSSVDGFGGSSAGGTQCPP
GFLEEFFRDSDFDSLDSILKGLYEDLRGSVIKVSALGNFQQPLRALLYLVSFPVGAKSLV
NHPWWIPKGVYLNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGLQCFSEASTHRQADL
SSSFTTIKTVMNNLYDGLAEVLLSLLKNMDTRENVLEYLAEVINTNSSRAHIQVDPLSCA
SSGMFVSLSAVMLRLCEPFLDVNLTKRDKIDPKYVFNSNRLDLRALTALHASSEEVAEWL
KKNNLGKTDGSRQDTEVENRLLQSQDATSSGSTASGSSNAKLASTGDKTKYPFICECFFM
TARVLHLGLLKAFSDFKHLVQDIQRCEDALSTLKSMQGHASTPALKLEVSRLEKEIELNS
QEKLCYEAQMLRDGALIQNALSFYRLMVVWLVSLVGGFKMPLPSTCPMEFAAMPEHFVED
AMELLIFASRIPKALDGVLLDDFMNFIIMFMASPEFIRNPYLKAKMVEVLNCWMPRGSGP
SVTATLFEGHQLSLEYLVRNLLKLYVDIEFTGAHNQFFDKFNIRHNIAELLEYLWQVPSH
RNAWRQIAKEEEKGVYLTFLNFLINDSIYLLDESLNKILELKELEAEMSNTTEWEQRPAQ
ERQERTRLFHSQENIIQINMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQ
LVGPQRKSLTLKDPEKYEFRPKQLLKQIVYIYVHLARGDTENIFPAAISKDGRSYNEQLF
SAAADVLRRIGENGRVIQEFVQLGAKAKVAASEAMDTEAALGEIPDEFLDPIQYTLMKDP
VILPSSRITVDRPVIQRHLLSDNTDPFNRSHLTADMLIPNNELKARIDEFIKSQEMKKRG
KSLGVDRTKATIQTTSSKMLID
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggccgccccaaaacctcaaaagaggtctctggaggaaatcgaggacataatcctccgg
aaagtcttcctcgtgtctctgaccgataccgtggagttatcatccgattcccgaatcgtg
tacttggagatgaccgcggccgaggttctgagcgagggcaaggaattgaggctttctagg
gatttgatggagcgggtcctgatcgatcggctctccgggaatttttcctcggcagaacag
cccttccagtacctggtcggctgctatcgccgcgccttcgacgagggaaagaagatcgct
tccatgaaggacaagggtgttaagtccgagatggagtcggtggtgaagcaagccaagaaa
ttgtcggtctcgtattgtaggattcacttggggaaccctgagttgttcccgaatccgctg
aattcgaatgagaagtcacgttcgagtaaatcacctttgttgccgctgattttctctgag
gttgggagctcggtggacgggttcggaggtagtagtgctggtggcactcaatgcccccct
ggtttcttggaagagttctttagggactcggacttcgatagcttggactcgatattgaag
gggttgtatgaggacttgaggggcagtgttattaaggtttcagcgctggggaactttcag
cagcctttaagggctttgctgtatttggttagcttcccggttggcgccaaatcattagtg
aatcacccgtggtggattccaaaaggcgtttatttgaacggccgggttattgagatgacg
agcatattgggccccttttttcatgttagcgctctgcccgatcatgccattttcaagagc
cagcctgatgtggggctgcaatgcttttcagaagcatcaactcaccgacaagctgattta
tcatcatcatttaccacaatcaaaacagtcatgaacaacttatatgatggtctagcagaa
gttcttctctcactccttaaaaatatggacacccgtgaaaatgttcttgagtatcttgca
gaggtgatcaatacaaactcgtcgagggctcatatccaggttgatcctctatcttgtgca
agctcaggcatgtttgtcagtctcagtgctgtcatgcttcgcctgtgtgagcctttttta
gacgtgaacttaacaaaaagggataagattgatcccaaatatgtatttaacagtaacaga
ttggatttaagagcgttgactgctctccatgcatcatcagaagaagttgctgaatggctt
aagaaaaacaatttgggtaaaactgatggctctagacaagatactgaagttgaaaatcgg
ttgctacaatctcaagacgccaccagttctggcagcactgccagtggatcctctaatgca
aagctggcatcaactggtgataaaactaaatatccatttatttgcgagtgcttctttatg
actgcaagggtgctccacttgggtttattaaaagcattctctgactttaaacatttagtt
caggacattcaaaggtgtgaagatgctctctctactcttaaatccatgcaagggcatgct
tctacaccagcgttgaagctggaagtatctcgccttgagaaagaaatagagttgaattca
caggagaagctttgttatgaagctcagatgttgagggatggagcacttattcagaatgct
ctttctttctaccggttaatggtggtttggttggttagccttgttggtggatttaagatg
cctctgccatccacatgcccaatggaatttgcagctatgccagagcattttgtggaagat
gcaatggagttgcttatatttgcttcacggattccaaaagctttggacggggtcttgctg
gatgacttcatgaactttattatcatgttcatggcaagtccggaatttattagaaaccct
tatcttaaggcaaagatggttgaagtgctgaactgctggatgccccgtggaagtggccct
tctgttactgctactctgtttgaagggcaccaactgtctctcgagtatcttgtgagaaat
cttctgaaactttatgtcgacattgagttcactggtgctcacaatcagttctttgacaag
tttaacatccgtcataatattgccgaacttctcgagtacctgtggcaggtccctagtcat
cgtaatgcttggagacagattgccaaggaggaggaaaagggtgtctatctgactttctta
aacttcctgatcaatgatagcatttatctccttgatgaaagtcttaacaaaattcttgaa
ctcaaagagttggaagctgagatgtcaaataccaccgaatgggagcagagaccagctcaa
gagaggcaggagagaacccgactattccactcccaagagaatattatccagatcaatatg
aaattggcaaacgaggatgttagtatgctggcatttacttcagagcagattacagcgcct
ttcctacttcctgagatggttgagagagtggccagcatgctcaattactttttgttacaa
cttgtgggcccccaaagaaaatctcttactctgaaagaccctgagaaatatgaatttcgt
ccaaaacagttgctgaagcagattgtctacatatatgtccatttagcaaggggtgataca
gaaaatattttcccagctgccatatcaaaagatggtcgttcatacaatgagcagttattt
agcgctgcagcagatgttcttcgaagaattggggaaaatgggagggtaatacaggagttt
gttcagctaggtgctaaggccaaagttgcagcatctgaggcaatggacactgaagctgct
cttggagagataccagatgaattccttgacccaattcaatacactttaatgaaggatcca
gttatattgccttcttcaaggatcaccgtagaccgacctgtcattcagaggcatctgctt
agtgataatacggaccctttcaaccgttcccatcttactgcggacatgctgattccaaac
aatgaattgaaggcaagaattgatgagttcatcaagtcccaagaaatgaagaagcgtgga
aaaagccttggcgtggacagaacaaaggcgacaatacaaaccacgagtagtaaaatgtta
attgattaa
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integrated database retrieval system
