Juglans regia (English walnut): 108987673
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Entry
108987673 CDS
T05245
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
jre
Juglans regia (English walnut)
Pathway
jre03430
Mismatch repair
jre03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108987673
03460 Fanconi anemia pathway
108987673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jre03400
]
108987673
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
108987673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
108987673
NCBI-ProteinID:
XP_018816192
UniProt:
A0A2I4E9W5
A0A833WMP8
LinkDB
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Position
11:complement(36806149..36820717)
Genome browser
AA seq
743 aa
AA seq
DB search
METQPGDCDAVPLPMEMDEATQPKDPPKISRLDDSVVNRIAAGEVIQRPVSAVKELVENS
LDAHSTSISVVVKDGGLKLIQVSDDGHGIRYDDLPILCERHTTSKLSTFEDLQTIKSMGF
RGEALASMTYVGHVTVTTITKGQLHGYRVSYRDGVMEHEPKACAAVKGTQIMVENLFYNM
IARRKTLQNSADDYSKIVDLLSRFAIHHIHVGFSCRKHGAGRADVHTVAASSRLDAIRSV
YGVSVARSLIKIETSDHNPSSSVFKMDGFISNSNYVAKKIIMVLYINDRLVECTALKRAV
EIVYAATLPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQEVIIEKIQSVVESKLRN
SNESRTFREQIVEQSPSDNIAMDKDPNFSPSPSGSKSQKVPVHKMVRTDSLDPAGRLHAY
LQVKPCGPLENNPSLTTVRSSVRQRRNPKEGADLTSIQELIDEIDCNCHSGLLEVVTHCT
YVGMADDIFAVLQHDTHLYLANVVNLSKELMYQQVLRRFAHFNAMQLSDPAPIFELIMMA
LKEDNSDPGCHENDDLIDKIAEMNTELLKQKAGLLEDYFCIHIDIHGNLSRLPVILEQYT
PDMDRVPEFVLCLGNDVDWEDEKNCFQSISAALGNFYAMHPPMLPNPSGDGLQFYKKRKP
LRNSEDEEDIPENIGDDTTEENEIEQELLSEAETVWAQREWSIQHVLFPSMRLFFKPPTS
MATNGTFVRVASLEKLYKIFERC
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccaacccggcgattgcgacgctgtgcctctcccgatggaaatggacgaagcg
acgcaaccaaaagatcctcccaaaatttcccgcctcgatgactccgtggtcaaccgaatc
gcggcaggagaggtgatccaacggccggtatccgccgttaaagagctggtggagaacagc
ctcgacgcccactccacctccataagcgtagttgtcaaggacggcggcctcaaactcatc
caagtctccgacgacggtcacggaatccgatacgacgacttgccgatattatgcgagagg
cacacaacgtcaaagctttctacgtttgaagatttacaaacgataaagtcaatggggttc
cgaggagaagctctggcaagcatgacttatgtcggtcatgttactgtcactaccattacc
aaagggcagctgcatggttacagagtatcttatagagatggtgtcatggagcatgagccg
aaggcatgcgctgctgtaaaaggaactcagataatggttgagaatctattctataacatg
attgcccggaggaagactctacaaaattctgctgatgattattcgaagattgtagacttg
ctaagccggtttgccattcatcacatacatgttggattctcatgccgaaagcatggagct
ggcagagcagatgttcatacagttgctgcatcatctaggcttgatgctattcgatcagtt
tatggggtgtcagttgctcgatcgcttatcaaaattgaaacttctgaccataatccatct
agttcagttttcaagatggatgggttcatctcgaattcaaattatgttgcgaaaaagata
attatggtactttatatcaatgatagattggtggaatgcactgcattgaagagagctgtt
gaaattgtttatgctgcaaccttgcccaaagcatctaaacccttcatatacatgtcaatc
gtattgccacctgaacatgttgatgtgaatgtgcacccaacaaagagagaggtaagtctt
ttaaatcaagaagttattattgagaagatacagtcagtggttgaatcaaaattgaggaac
tcgaatgagtcacggacatttcgggagcagatagttgaacaatctccatcagataatatt
gctatggacaaggaccctaatttcagcccctcgccatctggatcaaaatcacaaaaagtt
ccagtgcataaaatggtcagaacagattcattagatcctgctggaaggttgcatgcttac
ttgcaagttaagccttgtggaccacttgaaaataatccgagtttgactactgtgagatct
tctgttagacaaagaagaaacccaaaggagggggcagatctgactagcattcaggagctc
attgatgaaattgattgtaattgtcattctggtctgctggaagttgtaacacactgtaca
tatgttggaatggcagacgacatctttgcagtgcttcagcacgacactcatctctatctt
gcaaatgtggtgaacttgagcaaagagctcatgtatcagcaagttctgcgccggtttgcc
cattttaatgctatgcaattaagtgacccggctccaatttttgagttgattatgatggcg
ttgaaagaagacaattcagatccgggatgccatgagaatgatgacctaatagacaaaata
gcagaaatgaataccgaattgctcaagcaaaaggctggactgttagaggattatttctgc
attcatattgatatacatggaaatttgtctagacttccagtcatacttgagcagtacaca
cctgacatggatcgtgtccctgaatttgtactttgtttgggcaatgatgttgactgggag
gatgagaaaaattgcttccaatcaatttcagctgctcttggaaacttttatgcaatgcat
cctcccatgttacccaacccatcaggtgatggtttgcagttctacaaaaagagaaaacct
ctcaggaattctgaagatgaagaagatattccggagaatataggggatgatactacagaa
gagaatgaaattgagcaggaactactttcggaggcagagactgtgtgggcccagcgtgaa
tggtcaatccaacatgtcttgtttccatccatgagactctttttcaagccacctacttct
atggctactaatggaacctttgtccgggtcgcttcactggagaagctttacaagatcttt
gaaagatgttaa
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