Juglans regia (English walnut): 108987687
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Entry
108987687 CDS
T05245
Name
(RefSeq) protein SHORT ROOT IN SALT MEDIUM 1-like
KO
K25827
cell division cycle and apoptosis regulator protein 1
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
108987687
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
108987687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBC1
BURAN
LAIKA
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
108987687
NCBI-ProteinID:
XP_035539964
UniProt:
A0A6P9DWH0
LinkDB
All DBs
Position
13:complement(11604166..11616302)
Genome browser
AA seq
1378 aa
AA seq
DB search
MYSSRGSNAYGQQSYTGQSTYGANLGAAYSASSVGNPDGASQQSLASRHSSMLAGSQETD
VGGYRAHPPAVTHYGGQYSSVYGAAALSSAQQVPATNVKGAGPSILESRGSYSSVRPDSP
KFASSDYVSSSGHGYSHKGDQFYAEKVPDYAGIERRQYGDRQSTYLGRDLQSEPTGRYAD
SLGLSHQNQNDMYDRIDQALLRQEQLLKAQSLQSASLDGTARQADYLAARGTTSRHPTQD
LLSYGGRMDADPRSLTMLSASSYSGQQAPSILGAAPRRNMDDLMYTQSSSNPGYGVSLPP
GRDYATGKGLHGTSLELDYPSSTLSRGGPTRIDDHKDDKAGYLREFELREEERRREHLRE
RERDREREKERERERERERDRERRILERREKERDRERKRGLETKHNRTPPRVSRDRRGSS
LAKEGKLLRRNSPHRDALHRHHSPVKEKRREYVCKVYSSSLVDVERDYLSIDKRYPRLFV
SPEFSKAVVNWPKENLKLPIHSPVSFEHDFIEEERLTELKGSSAELLAEETTKSGNTVWS
AKMILMSGLSKNAMEELSSEKIYDNRIPHICNIIRLAVLRKEKSLMAIGGPWNSADGGDP
SVDDTSLVRTALRHAKNITPLDLQYCCHWNRFLEIHYDRFGSDGLFSHKEVTVLFVPDLS
ECLPSLEAWKDQWFAHKKAVAERERQLTLKKERSREKKDGIKDKEKDSTKDLKKDSTNLK
MSTSSGQSEDVDKKDKDVNDVKGITVEEKVDGNDKRLEKKGGTETGKENMTVEKKEQGES
VSAQTSGVVKPAKKKIIKKIVKQKVVDKTAHDSASKQNDSPDEKNNGDKNANSEIPNLPD
ESSGAPAGVKTFVRKKVIRKVPVVKTARNEDSEDKPKDNSDPCTAAVVQRTAVKTTVKKK
IIKRVAKRKVEGLESGDRIADTKKDVDRDEIKVVGAIDETENMVGQAADADNQVSEIKRS
EKKMVPRTNTKTLITKMQDDTVDPSKTEIKTDKDDKDEKRTGEKSGQGIKVEIEVDKQKI
SLKDDHSSKDGKSKDGEKSKDEREKKDNDGKDESRSKSKNELKEKRKPEEPPRHPGLILQ
TKCSKDSKLHSVSLSLDSVLDYTDKDIDESSFELSLFAESLYEMLQYQMGCRLLTFLQKL
RINFVAKRNQRKRQRDEAHEKKRDKKSPAKRLRTNDLHVKDSTEIDGVAHPDANKTMAEE
DKFVDHVDELKMEDETDGDEDPEEDPEEYEEMEESSMQHESSYVNNEEEGKTDLSAEPEK
VSGMETDKAEETLKEKPKAAETKPKSGEEMRKRKDGERETSSVKEAAVDKELLQAFRFFD
RNRVGYIRVEDMRLIIHNLGKFLSHRDVKELVQSALLESNTGRDDRILYNKLVRMFDT
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgtattcctctagaggtagcaatgcgtacgggcagcaatcttacaccgggcaatccaca
tacggcgcaaatctgggagctgcttactctgccagttctgttggaaaccctgatggggcc
tcgcaacagtcattggcttctcggcattcatcaatgttagctggttctcaggaaactgat
gttggcgggtacagagctcatcctccagctgtaactcactatggggggcagtatagctct
gtgtatggggcggctgctttaagtagtgctcagcaggttcctgcaacgaatgtgaaaggt
gctggaccgtccattttggaaagtcgtgggagctattcttcagttagaccagattcacct
aaatttgcatcgagtgactatgtctcatcctcaggccatggatatagtcacaaaggtgat
caattttatgcagagaaggttcctgattatgctggaatagaaagacggcaatatggtgat
cgacaaagtacttatctagggagggacttgcaaagtgaaccaactggacgatatgctgat
tctcttggtcttagtcatcaaaatcagaatgatatgtatgatcgcattgatcaggcattg
cttcgacaagaacaattgttaaaagctcaatcgctgcaatctgcttctttggatgggact
gcaagacaagcagattatcttgcagcaaggggtaccactagtcgtcatcccacccaagat
cttctttcttatggaggaagaatggatgctgatcctcgcagtttaacaatgcttagtgct
tcctcatatagtggacaacaagctccatcaatattgggagcagctccgcgtagaaatatg
gatgatctcatgtatacacaaagttcttcaaatcctggctatggagtgagcctacctcct
ggtagggactatgccaccggaaaggggcttcatggcacatctctcgaattggattatcca
agtagcacgttgtcacgtggtggtcctacaaggattgacgatcacaaggatgataaggct
ggttatcttcgggagtttgagctaagggaggaggagcggcgtagggaacatttgcgtgag
agagagagggatagagaaagggagaaggaacgggaacgggaacgagaacgggaaagagac
cgtgaaaggcgtatcttggaacgacgggagaaggagagagatcgagagcgcaaacgtgga
cttgaaaccaagcataatcgaactccaccaagggtatctagggaccggcgtggttcctct
ttggcgaaggaggggaaattgttgcgacggaattctcctcatcgtgatgctttgcatagg
catcattcacctgttaaagaaaaaaggagagaatatgtctgcaaggtttactcttccagt
ttggtagatgtggagagggattatttgtcgatagataaaagatatcctagactctttgtg
tccccagaattttccaaggctgttgtgaactggccaaaggagaatcttaaacttccaatc
cattcacccgtcagttttgagcatgattttattgaagaagagaggctaaccgagctgaaa
ggttcgtctgctgagcttttggctgaagaaaccacaaaatctggaaatacagtgtggagt
gcaaagatgattttgatgagtggacttagcaagaatgccatggaggagctgtcatctgaa
aaaatttatgataatcgcataccccatatttgcaatatcattaggcttgctgtgcttaga
aaggaaaagtctttgatggcaattggtggtccatggaattccgctgatggtggcgatcca
tcagttgatgacacctcattagttcgaacagcccttagacatgcaaaaaatattactcca
cttgatttgcagtactgctgccattggaatcgttttcttgagatacactatgacagattc
ggaagtgatggactgtttagccataaggaggtgactgtattgtttgttccagatttgtcc
gaatgtctcccctcattggaagcatggaaagaccaatggtttgcccacaaaaaggctgtt
gctgagagagagcggcaacttacattgaaaaaagagaggtctagagagaagaaagatggg
atcaaagataaggaaaaggattccacaaaagatctcaaaaaggattccacaaatctgaag
atgtctacatcctctggacaatcagaagatgttgacaaaaaggataaagatgtcaacgat
gtgaaagggatcacagttgaagaaaaggttgatggaaatgacaaaagacttgagaaaaaa
ggtgggactgaaacaggtaaggaaaacatgacagtggagaagaaggaacaaggagaatct
gttagtgctcagacgagtggcgttgtgaagcctgcaaagaagaagattataaagaagatt
gtcaaacagaaggttgttgataagacagctcatgatagtgccagcaaacaaaatgacagc
ccggatgagaagaataatggagataagaatgccaactcagagattcctaatctaccggat
gaatcttcaggtgctcctgctggggttaaaacatttgttagaaaaaaggtgataagaaag
gttccagtagtaaaaactgctcggaatgaagatagtgaagacaaaccaaaggataattca
gatccatgcactgctgcggttgtgcaacgtactgctgtaaaaacaactgtgaagaaaaaa
ataattaagagggtggctaaaagaaaggttgaaggtttggaatcgggtgacaggattgct
gacactaagaaagatgtggacagagatgagattaaggtagttggggcaattgatgaaaca
gaaaatatggtggggcaagcggcagatgcagacaatcaggtcagtgagatcaaaaggtca
gaaaagaaaatggttcccaggaccaatactaaaactcttatcacaaagatgcaagatgat
actgttgatccaagcaaaacagaaataaagaccgacaaggatgataaggatgagaaaaga
acgggtgagaaaagtggccaggggatcaaagtggaaattgaggttgacaagcagaaaatt
tcactgaaggacgaccatagtagcaaggatggaaaatcaaaagatggggagaaatccaaa
gatgagagagaaaaaaaagacaacgatggaaaagatgagtctagaagcaaatcaaaaaac
gaattgaaagaaaagaggaagcctgaagaacctcctcgacaccctggtttgatattacag
acaaaatgtagcaaggattcaaaacttcattcagtgtcactttctctggattcagtcttg
gattatactgacaaggacattgacgaatcatcatttgagttgtcattatttgctgaatcg
ttgtatgaaatgcttcagtatcagatgggttgtcgtcttttaacatttctccagaaacta
cgcataaactttgtggcaaaaagaaatcaacgtaagaggcagcgggatgaagcccatgag
aagaaaagggacaaaaaatcaccagcaaagcgactgaggactaatgacctccatgtgaaa
gacagtactgaaatagatggtgtagctcatccagatgctaataaaaccatggctgaggag
gataaatttgttgatcatgttgatgagttgaaaatggaagatgaaacagatggtgatgaa
gatccagaggaagatcctgaagaatatgaagaaatggaggagtcaagtatgcaacacgag
tcatcttatgtgaataacgaagaagaggggaagaccgatctgagtgctgagcctgaaaag
gtgtctggaatggaaactgacaaagcagaggaaactcttaaggagaaaccgaaagctgca
gagacaaagcccaagtctggtgaggaaatgcgtaaaaggaaagatggagagagagagact
tcttctgtgaaggaggctgctgttgacaaagaactattgcaggcttttaggttttttgac
cggaatcgagttggctacattagggttgaagatatgaggttgatcatccacaacttgggg
aagttcctctcgcacagggatgtcaaggaacttgtgcaaagtgcattgctagagagcaac
accggtagggatgaccgcatcctctacaataagctggtgcgaatgtttgacacttga
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