Juglans regia (English walnut): 108988147
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Entry
108988147 CDS
T05245
Name
(RefSeq) sister chromatid cohesion protein SCC2
KO
K06672
cohesin loading factor subunit SCC2
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
jre03036
]
108988147
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
108988147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
PHD_2
zf-RING_16
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
108988147
NCBI-ProteinID:
XP_018816828
UniProt:
A0A2I4EBQ3
A0A833Y970
LinkDB
All DBs
Position
1:7833814..7851631
Genome browser
AA seq
1817 aa
AA seq
DB search
MSNPIVPGSLVSASGSGSGWGHRGIGLSNTIHSEVAPCLPLPSLPVFCGASNQDLRLFDE
PGRGSFSSLDRSEVLAQSSRIADLLRQTDVSYLNLKKDARVVSYGYAEPLELHDQVLQCH
PEAFECSTAGPIKEQISSGTVSEKKPFEQSVPVTVQAQRGNSAAHNYHTDYVVTNHVSTS
SSRKPKLKKKGGDDFSSSVGPDHAEIQDATIGSFCELLEDFCGRAEIPSDDRDEAEWLSV
PLSDLRMLVTEIMSIRAKKLLHLVPVDVLVRLLKVLDHQIHRAEGLSIDECEHSDSDIVL
SIFCALESIHAALAVMGYNEMQKQLYKEEIIERILEFSRHQIMDVMCAYDPSYRALHKPS
ENGEFEGDEDEEPGPEFGSASKKRRSVKTVRVKKSSLNKVSAAMNTILQKMCTILSLLKD
LLLIERLSDSCILQLVKTSFTTFLVDNIQLLQLKAIGLISGIFYSYTQHRTYVIDEILQL
LWKLPSSKRALRSYHLPDEEQRQIQMITALLIQLVHCSANLPEALRQATSGNPILEVSID
SSYPTKCQESATEACCLFWTRVLQRFASLKTQDASEMKAMMENLVMDLLTTLNLPEYPAS
APILEVLCVLLLQNAGLKSKDISARTMAIDLLGTIAARLKRDSVLCRMDKFWILQELDSA
SDVDRSYPKGSCSICLDGRVEKLFFTCQSCQRLFHADCMGVREHEVPNRSWQCQICICRK
QLLVLQSYCKSQCKDGGKKTHNLSEKNPEASETIAKVEIVQQLLLNYLQDVGSDDVHLFV
RWFYLCLWYKDDPKSQQKLIYYLARLKSKAIIRDSGTTSLLTRDSVKKITLALGQNNSFS
RGFDKILHMLLASLRENSPVIRAKALRAVSIIVEADPEVLCDRRVQLAVEGRFCDSAISV
REAALELVGRHIASHPDVGLQYFEKVAERIKDTGVSVRKRAIKIIRDMCTSNGNFSGFTS
ACIEIISRVSDDESSIQDLVCKTFYEFWFEEPSGSERLVFGDGSSVPLEVAKRTEQIVEM
LRRMPNHQLLVTVIKRNLALDFFPQSAKAAGINPVSLTSVRKRCELMCKCLLEKILQVEE
MNSEEVEVRALPYVLVLHAFCVVDPKLCAPASDLSQFVVTLQPYLKTQVDNRMVAQLLES
VIFIIDSVLPLLRKLPQTVVEELEQDLKHMIVRHSFLTVVHACIKCLCSLGKVAGKAASV
IEYLIQVFFKRLDTQPADNKQQVGRSLFCLGLLIRYGKSLLSDSSSRSIDVVSSLSLFKK
YLRMEDFIVKVRSLQALGFVLIAWPEYMLENDIGKILEATLSSGCDVRIKMQALQNLYEY
LLDAESQMGTDKASNNTIHCSVEGGHSVPVAAGAGDTNICGGIVQLYWDNILGRCLDFNE
PVRQSALKIVEVVLRQGLVHPITCVPYLIALETDPQEVNSKLAHHLLMNMNEKYPAFFES
RLGDGLQKSFIFIQLISGIHENVNQKVQYKVPGNVKGKPDGGSFSQARLGVSRIYKLIRG
NRVSRNKFMSSIVRKFDNPSWNDSVVHFLMYCAEILALLPFTTPDEPLYLIYAINRVIQV
RAGALEANMKGLSMYLSQRYLEKIPYENGQQEPAVKPDFNEVASMDLNGTIQHEPAVQPI
FNHTVDLNESIRQETTDQPVPIHSISLEAKIHSMGSDVSIVLSADDLRKVQADCLAATAL
QLLLKVKRHLKIVYSLNDARCQAFSPNEPAKPGEVLSRQNIPFAIGEIRTSLPTTHQELI
QRYQEFKSSLKEDVVDYSLYTANTKRKRPTPRKGRKSGYMGGEDDEDDHDDEDWTGGVRR
LSNSGRKGNSNRGSRQR
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatccaatcgttcccggttctttggtttcggcctccggctctggctccggctgg
ggtcaccgaggcatcggcctctccaacaccatacactccgaagtcgcgccgtgcttgcct
ttgccctcgctcccggtcttctgcggcgcctctaatcaggacctccgactcttcgacgag
cctggccgtggtagcttcagctcgcttgaccgcagtgaggttcttgctcagtccagtaga
atcgctgatctgctacgccaaaccgatgtgtcttacttgaatctcaaaaaggatgcaagg
gtagtttcatatggctatgcggaacctttagaactacatgaccaagttttgcaatgccat
ccagaagcatttgagtgcagtactgcaggtcctattaaggagcaaatatctagcggtacg
gtatcagaaaagaagccctttgaacaaagtgtgcctgtcacagttcaagctcaaagaggc
aatagtgctgctcacaattatcatactgactatgttgttaccaatcatgtatcaacatcg
tcttctagaaaaccaaaactcaagaagaaaggtggcgatgacttctcatcatcagttgga
ccggatcatgctgagattcaagatgccaccatcggaagcttttgtgagttgttagaggac
ttctgtggtagagctgaaattcctagtgatgatcgggatgaagcagagtggttatcagtt
cctctttctgatcttagaatgcttgtaactgaaataatgtctatccgtgcaaagaaactt
ctacatttggttcctgtagatgttcttgttaggctgttaaaggttctagatcatcagata
catcgagcagaaggcttgtcaatagatgaatgcgagcactcagattcagatatagtttta
tcgatcttttgtgctctggagtctattcatgctgctctagcagtgatgggttacaatgaa
atgcaaaagcagctatataaagaagagataattgaaagaattctggagttctctaggcat
cagattatggatgttatgtgtgcgtatgatccatcatatcgtgctttgcataaaccaagc
gaaaatggagaatttgaaggtgatgaagatgaagagcctggtcctgaatttggttcggca
agtaagaagcggcgtagcgttaagacagttcgagtgaagaagtcatcattaaacaaggtc
tctgctgcaatgaataccattcttcagaaaatgtgcactattcttagtttactcaaggat
ttattgttaatagagagattatctgatagttgcatcttacaacttgtgaaaacgagcttc
acgacattcttggtggataatatccaactcttgcaactgaaggcaattggtttaattagt
gggatattctattcatatacacagcatcgtacttatgtgatagatgaaatacttcagctg
ctttggaagttaccatcctcaaagcgagcattaagatcctatcacctgcctgatgaagaa
caaaggcagattcagatgataacagctttgctgattcagttggttcactgtagtgcaaac
cttcctgaagctttaaggcaagcaacaagtggcaatcccattttagaagtctcaattgat
tctagttacccaaccaaatgtcaagagtcagccacagaggcatgttgtcttttttggacc
cgtgtgcttcagcgttttgcaagtttgaagactcaagatgcatctgagatgaaagcaatg
atggagaatcttgttatggatttgctgacaacattgaatttgcctgaatatcctgcttca
gctcctattttggaggttctgtgtgtcttgttactccagaatgctgggctgaaatctaaa
gacatctctgcacgtacaatggccattgaccttcttggtacaatagctgcgagattgaag
cgtgattcggtgctttgcaggatggacaaattttggatactacaggaattggatagtgcc
agtgatgttgatcgcagttatccaaaaggttcgtgttctatttgtttggatggaagggtt
gaaaagttgttctttacatgtcaaagttgtcagaggttgtttcatgctgactgcatgggt
gtaagagagcatgaagttcctaatagaagctggcagtgtcagatttgcatctgcaggaag
caacttctcgtattacaatcatactgtaagtcgcaatgcaaggatggtgggaaaaagact
cacaatttgtcagaaaagaaccctgaagcttctgagacaattgcaaaagttgaaattgtt
caacagctgctattgaattacctgcaagatgttggttctgatgatgttcatctttttgtg
cgctggttttatctttgcttgtggtacaaggatgatccaaaatctcagcagaagctcata
tactatcttgctagattgaaatcaaaagcaataatacgtgattctggaactacttcattg
ttgacaagggattcagtcaagaagattactttggcattgggacaaaataactccttctcc
agagggtttgataagattcttcatatgcttctggcaagtttgagggagaattctcctgta
attagggccaaggctctaagagcggttagtattattgtagaagctgatcctgaggtactg
tgcgatagacgtgtgcaattggctgttgagggaaggttctgtgattctgcaatatctgta
agggaagcagcactggaacttgtgggcaggcacattgcttcacatcctgatgttggtttg
cagtactttgagaaggttgctgagagaattaaagatactggagttagtgttcgaaaacga
gctatcaaaattattcgggatatgtgcacttcaaatggcaacttctctggatttacaagt
gcctgtattgagataatttctcgtgttagtgatgatgaatcaagtattcaggatcttgtt
tgcaagacattttatgagttctggtttgaggaaccttctggttcagagagacttgttttt
ggagatggtagttctgttccactggaggtggctaaaagaactgagcagattgttgaaatg
ttgaggaggatgccaaatcaccaacttcttgtcactgttattaagcgcaacttagctctt
gattttttcccgcaatcagctaaggctgctgggatcaaccccgtgtccctaacatcggtg
cgcaaacgttgtgagttaatgtgcaagtgcttattggaaaagatattgcaggtagaggaa
atgaacagtgaggaagtggaggtgcgtgcactcccttatgtgctggtcttgcatgcattt
tgtgttgtggatccaaaactctgtgcccctgcctctgatctttctcagtttgtggttacc
ctacagccatatcttaagacccaggttgacaatcgaatggttgctcagttactggagagt
gtaatttttataattgattctgttctaccattgcttcgaaaattacctcaaactgttgtt
gaagaactcgagcaggacttgaagcacatgattgttcggcattcctttttgacagttgtc
catgcatgcatcaagtgtctttgctctttgggcaaagttgcaggaaaagctgctagtgtg
attgagtatcttattcaggtgttttttaaacgtttggatactcagccagctgataacaag
cagcaagtggggcggtcccttttttgccttggattgcttatacgctatggaaaatctttg
ctgagcgactccagtagcagaagtattgatgtggtcagtagtctcagcttgttcaaaaaa
tatctccgcatggaggatttcattgtgaaggttagatcattgcaggcattaggctttgtt
ttaattgcttggcctgaatatatgttggaaaatgatattgggaaaatactagaggcaact
ttgtcttctggctgtgatgttcgaattaagatgcaagcgttgcaaaacttatacgaatat
cttcttgatgcggaaagtcaaatgggaacagataaagcaagcaacaatacaattcattgt
tctgtagaaggtggccacagtgtacctgttgctgcgggcgcaggagatactaatatatgt
gggggtatagttcagttgtattgggataatatcttaggtagatgtctggacttcaatgaa
ccggttcggcaatcagcccttaagattgttgaagttgtgctgcgccagggtcttgttcat
cccattacttgtgtcccgtaccttatagcccttgaaacagatccgcaggaagtcaattca
aagttggctcatcatttgttgatgaatatgaatgagaagtaccctgcattttttgaaagc
cgtttgggggatggccttcaaaagtcattcatttttatacaattgataagtggtattcat
gaaaatgtaaaccagaaagtccaatacaaggtcccaggaaatgtgaaggggaaacctgat
ggtggctcattttctcaagcaaggcttggagtctctagaatatacaagcttatccgtgga
aaccgagtttcaagaaacaaatttatgtcctcaatcgtgcggaagtttgataaccccagc
tggaatgattctgtagtccatttcctgatgtactgtgctgaaatacttgctttgctacca
ttcacaacacctgatgagccactatatttgatctatgctataaatcgagtaatacaagtc
agggctggggcactcgaggcaaatatgaaaggcttgagtatgtatttgtcacaaagatat
ctggagaagataccttatgagaatggacagcaagagcctgctgttaagcctgacttcaat
gaggtggcttcaatggatttgaatgggacaattcaacatgagccggctgttcagcctatt
ttcaaccataccgtggatttgaatgagagtatacggcaagagacaactgatcagcctgtc
ccaatccatagcatctcactggaggcaaagatacatagcatggggtctgatgtttctatt
gttctttctgcagatgatctgcggaaagttcaggctgactgtctggcagctactgcgttg
cagcttcttttgaaagtaaagaggcacctaaaaattgtgtatagcctgaatgatgcccgg
tgccaggctttttccccaaatgaacctgcaaaacctggtgaggttctctccagacagaac
attcccttcgccattggtgaaatacgcactagtttgcctaccactcatcaagaattgata
caaagatatcaggaattcaagagttctctgaaggaagatgtggttgattattcgctttac
acagcaaataccaagaggaagcggcccacccccagaaaaggacggaaatccggatacatg
ggaggtgaagatgatgaagatgatcatgatgatgaggactggacaggtggggttcgcagg
ctaagtaatagcggcagaaaaggtaacagcaacaggggaagtaggcagcgatga
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integrated database retrieval system
