KEGG   Juglans regia (English walnut): 108988262
Entry
108988262         CDS       T05245                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
jre  Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:jre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:jre03036]
    108988262
   03400 DNA repair and recombination proteins [BR:jre03400]
    108988262
Chromosome and associated proteins [BR:jre03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    108988262
DNA repair and recombination proteins [BR:jre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108988262
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ HEAT_EF3_N
Other DBs
NCBI-GeneID: 108988262
NCBI-ProteinID: XP_018817020
UniProt: A0A2I4EC95
LinkDB
Position
7:44733313..44748693
AA seq 1156 aa
MAESSRLGQSIDSFVDSSCSLTQQAASLDTITSLVKNGVLSVEGLVREMEMYLTTTDNII
RARGILLLGEVLACLVSKPLENATIHSLIGFFTDRLADWKCLRGALVGCLALMRRKLDAG
MVTDTDAKAVAHSFLQNLQVQSLGQHDRKLCFELLECLLECYPDSVAPLGDELVYGICEA
VDSEKDPQCLLLTFRIIEVLARLFPDQSGPLASFAGDLFEILGCYFPIHFTHPKAEDLGI
KRDDLSEALMLAFSSTPFFEPFAIPLLLEKLSSSLPFAKVDSLKYLSSCTLKYGAERMLK
HAGAIWLAIKDAIYNSIQEPALSFTSESLVGLGFQENEIAKEALTLLQRVIVQSDSLYLS
LIVKDEDINMILNTITSYESYNDIYSQGRLKLHVVGRFLSISARSSIASCNRVFESFFPR
LMEILGLPVKNLSADHSPIVSSLISKRLNFGALYLCIELLASYRDLTAGSKEIASKSISA
SETCYGMLQSYSNLLTEAFCSTLVTSPQDADIYFGVKGLQILATFPGYVSPMLISEFESI
LITLMSIITLHFKKTLLWKLSLKALVNIGSFIDEYHESEKVSSYMGVVVEKSISLVSLDD
FTMPFPLKLEAISGIGASGLNYMLKIVRGLEEAIYTNLSEFYAHENMKSPEITIRLLECY
SNKVLPWIHENGSFDEVLLRFPVNVWSQIESHVDFSIQVQEMELLDATMTAMRHAVAFCS
VESQNKIIQKAYSILSSSTFFPLKEFTSLTIQFQLGGLQLARKIDNLSYRDEWILSLFAS
VVIAARPQTPIPNLKEILQLFMTTLLKGSVPAAQALGSIVNKLGKESNELKISSDCTLEE
ALETIFRTKLWSSHDNGALMKCSGTNNGSEMSFADSCLGVVNNNLPQIHAITGLSWIGKG
LLLRGHEKLKDVTMIFLEFLLKNNKADAFPLKQNSLESSSERDLHPSVIKSAADAFHILM
SDSEVCLNRKFHAVIRPLYKQRFFSTMMPILQPLIMKNDSSLSRSMLCRAFAHIISDTPL
TPILSEAKKLIPIILDCLSMLNKDIQDKDILYSLLLVLSGILTDKNGQEAVIENVHHVIN
NLTKLIAYPHMMLVRETAIQCLVAMSELPHARIYPMRIQVLRAISNALNDPKRAIRQEAV
RCRQAWASIASRSLHF
NT seq 3471 nt   +upstreamnt  +downstreamnt
atggcagaatcgtctcggttgggtcagtccattgactccttcgtcgactcgtcttgttcc
cttacacagcaggctgctagcttggacacaatcacttctcttgtgaagaatggtgtatta
tctgtggaaggactggtcagagagatggagatgtatttgaccacaaccgataacatcatt
cgtgctagaggtatccttcttcttggagaagtactcgcatgtcttgtatcaaagccgtta
gagaatgctactatacatagcttgataggtttcttcaccgacagattggcagattggaaa
tgtttacgtggtgcactagttggttgcttggcactgatgaggaggaaacttgatgctggg
atggtcactgacaccgatgcaaaagcagttgcccactcttttttacagaacctacaagtg
cagtctttaggacagcatgataggaagctttgctttgaacttctggagtgcctgttagaa
tgctaccctgattcagttgctccactgggtgatgagcttgtttatggaatctgtgaagct
gttgactcagaaaaggatcctcaatgcttattgctgacatttcgtatcattgaagtactg
gcacgactatttccagatcaatctggtccgcttgctagttttgctggggatctctttgaa
attctgggctgttattttcctattcattttacacatccaaaagcagaggatcttggtatc
aaaagagatgacctatcagaggcactaatgttagcattctcctccacacccttttttgag
ccatttgccattccattgcttcttgaaaaactttcttcttctctaccatttgcaaaggtt
gattctctaaagtatctcagcagttgcacattgaagtatggagcagagagaatgttaaaa
catgctggagctatctggttggcaattaaagatgcaatatataattcaatacaagagccg
gctttatcctttacttcagaatcactagttggtcttggctttcaggagaatgaaattgct
aaagaagctttaacacttctccagcgggttattgtgcaaagtgatagtttgtatttaagt
ttgattgttaaagatgaagacataaatatgattttgaacaccatcaccagttacgagagt
tataatgatatttactcgcaaggcaggctgaaattacatgtagttggtcgtttcctctct
atttctgcaaggagttccattgcttcctgcaatagagtgtttgaaagtttcttcccgcga
ttgatggaaattctagggcttcctgtaaaaaacttgtctgcggatcactcaccaattgtc
agttctttaatctccaaaagacttaattttggagctctttatctctgcattgagcttctt
gcatcatacagagatttgactgcaggatccaaggaaattgcttccaaatccatttctgca
agtgagacatgctacggcatgcttcagagctattcaaatttattaaccgaggccttttgt
tctaccttggtgactagtcctcaagatgcagatatttattttggagtgaagggtttgcag
attctggctactttcccaggatatgtttctccaatgctgatatctgagtttgagagtatt
ttgatcacactcatgtcaattatcaccctgcatttcaagaagacattattatggaagttg
tcattgaaggcgttggtgaatattggctcatttattgatgaatatcacgagtctgagaag
gtttcaagctacatgggtgttgtagttgaaaagagtatttccttggtgtctcttgatgat
tttaccatgccttttccactcaaactggaagcaatatctggcattggcgctagtggactg
aattatatgctgaaaattgtccgagggttggaagaagctatatacaccaatttatctgag
ttttatgcacatgaaaatatgaagtcacctgaaatcaccatccggctcttggaatgctac
tctaataaggtgcttccatggatccatgaaaatggaagttttgacgaagttttgttgcgc
ttccctgttaatgtatggagccaaattgaaagtcatgttgattttagtattcaagtccaa
gaaatggagcttcttgatgcaacaatgactgcaatgaggcatgctgttgcattttgttca
gtggaaagccaaaacaaaataatccagaaagcttacagcattctttcatcaagcactttt
tttccactgaaggaattcacatccctaaccattcaatttcaactgggtgggctacagctt
gctcggaagatagacaatttgtcctatagagatgaatggattctttcattatttgcatct
gtagttatagcagctcgtcctcaaactcccattccaaatcttaaagaaatattgcaatta
tttatgactacacttctcaagggttctgttccagcagctcaggcattgggttccatagtc
aacaaattgggtaaagagtccaatgagttaaagatttcaagtgactgtaccttggaagaa
gctctagaaaccatttttcgaactaagttatggagttctcatgataatggtgctttaatg
aaatgtagtggaacaaataatggaagtgaaatgagctttgctgattcatgccttggtgtg
gtgaacaataatttgccccagatacatgccattactggactatcatggattggaaaaggt
ttgcttctgagaggtcatgaaaagcttaaagatgtaactatgatttttctggagttttta
ctcaaaaataacaaagcagatgcttttccattaaagcagaactcactagagagcagtagt
gagcgggatttacatccttcggtgataaaaagtgctgcggatgcatttcatattctaatg
agtgattctgaagtttgtttgaaccgaaaatttcatgcagtgatacgaccactctataag
caacgttttttctctaccatgatgcccattttgcagcctttgataatgaaaaatgattca
tcactttccagatctatgctgtgccgggcttttgcacatatcatatctgatactccacta
actcctattctgagtgaagccaagaagcttatacctatcattctggattgcttgtccatg
ctgaacaaggatattcaggataaagatatattgtacagtctcctgctagtcttatctggg
atattgacggataaaaatgggcaagaagctgtcattgagaatgttcatcatgttattaat
aaccttaccaagcttattgcctatcctcatatgatgcttgttcgggagacagctatacag
tgtctggttgccatgtccgagctgccccatgcaaggatctaccccatgagaatacaggta
cttcgggctatatcaaatgctcttaatgatcctaagagggctattcgtcaggaagctgtc
agatgccggcaggcatgggcatcaattgcatcgagaagtcttcatttctga

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