KEGG   Juglans regia (English walnut): 108988391
Entry
108988391         CDS       T05245                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
jre  Juglans regia (English walnut)
Pathway
jre03020  RNA polymerase
jre03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108988391
  09124 Replication and repair
   03420 Nucleotide excision repair
    108988391
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:jre03021]
    108988391
   03400 DNA repair and recombination proteins [BR:jre03400]
    108988391
Transcription machinery [BR:jre03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     108988391
  RNA polymerase III system
   RNA polymerase III
     108988391
  RNA polymerase I system
   RNA polymerase I
     108988391
DNA repair and recombination proteins [BR:jre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      108988391
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 108988391
NCBI-ProteinID: XP_018817183
UniProt: A0A834CY15 A0A2I4GX01
LinkDB
Position
3:complement(4083297..4089036)
AA seq 270 aa
MRALKESTLLSKSSFIHPNSVFKLSRATAILQLRRDKEDGFEGEGNAVLGPCLTSYVDNG
SSESHRYYLARRTMLEMLRDRGYAVPNSEIELSLQDFRAIHGQNPDLERLRISTTFRSDP
LKRILVIFCGPGVVKVNVFRSIASQIVNKDTLSGLILIVQNHITSQAMKAVDLFPFKAEI
FQITDLLVNITKHVLKPKHRILTDQEKRRLLKKYNIEEKQLPRMLRKDAIARYYGLEKGQ
VVKVTYGGGEITESHVTIYDPWTFVAMCPL
NT seq 813 nt   +upstreamnt  +downstreamnt
atgcgggcattaaaggaaagtactctactaagtaaatcgtcgtttatccatcctaactct
gtttttaaactctccagagcaacagcgatactccaattgaggagggataaagaagatggg
tttgaaggggaggggaatgcggtgctgggaccgtgcctgaccagctatgtggacaacgga
agctctgagagccatagatactatctggcacgcagaactatgctggagatgctcagagac
agaggctatgccgtgcccaactctgaaatcgagctctctctacaagacttccgggccatt
cacggccaaaacccagaccttgagcgcctccgaatctccacgacgtttcgctctgaccct
ttgaaaaggattttagtaattttttgtggacctggtgtagtaaaagttaatgtgttccgc
agcattgcatcccaaattgtcaacaaagatactttaagtggattgatattaatagtgcaa
aaccatataacatcccaagccatgaaagcagtggatcttttcccatttaaagctgaaata
ttccagattactgacttgcttgtgaacattacaaaacatgtgttaaagccaaagcatcgg
atactgactgaccaagagaaacggaggcttttgaaaaagtacaatatagaagagaagcag
cttcctcgaatgttacgaaaagatgcaattgcgagatactacggacttgagaaggggcag
gtggtgaaagtgacatatggtggtggtgaaatcactgagtcgcatgttaccatatatgat
ccttggacttttgtagcgatgtgtcctttgtga

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