Juglans regia (English walnut): 108988731
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Entry
108988731 CDS
T05245
Name
(RefSeq) serine/arginine-rich splicing factor RSZ22-like
KO
K12896
serine/arginine-rich splicing factor 7
Organism
jre
Juglans regia (English walnut)
Pathway
jre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108988731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
108988731
Spliceosome [BR:
jre03041
]
Common components
Common spliceosomal components
SR proteins
108988731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_7
Motif
Other DBs
NCBI-GeneID:
108988731
NCBI-ProteinID:
XP_035549263
UniProt:
A0A6P9EZW0
LinkDB
All DBs
Position
8:2126806..2133029
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AA seq
183 aa
AA seq
DB search
MTRIYVGNLDPRVSERDLEDEFRVFGVIESVWVARRPPGYAFIDFEDRRDAEDAIRELDG
KNGWRVELSHNSRGGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRVGPGRRRSR
SPPRYRRSPSYGRRSYSPLGRSLRRRSLTPRGRSYSRSPPYRGREELPYANGNGLRDRRR
SRS
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgactcgcatatacgtgggaaacttagatccacgagtttctgagcgggatcttgaggat
gaatttcgtgtttttggagttatagaaagtgtttgggttgcacggaggccacctggttat
gcttttattgactttgaagaccgtagagatgcagaggatgcaatccgtgagttagatggc
aagaatggctggagagttgagctttctcacaactctagaggtgggggtggtggtggtcgt
ggaggagggggccgtggtcgctctgggggttctgatttgaagtgctatgagtgtggtgag
cctggtcattttgctcgtgagtgccgtctgcgtgttggtcctggtagacgtcgtagtcgc
agtcctccccgatatcggagaagcccaagttatggtcgaaggagttacagtccccttgga
cgatcccttagacgccgcagcttgacacctcgtgggcgcagctacagcaggtcaccacca
taccgtggacgtgaggagttgccatatgctaatggaaatggtttgagggaccgacgccga
agcaggagctga
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