Juglans regia (English walnut): 108988892
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Entry
108988892 CDS
T05245
Name
(RefSeq) tRNA pseudouridine synthase A-like isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jre03016
]
108988892
Enzymes [BR:
jre01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
108988892
Transfer RNA biogenesis [BR:
jre03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108988892
Prokaryotic type
108988892
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF835
Motif
Other DBs
NCBI-GeneID:
108988892
NCBI-ProteinID:
XP_018817819
UniProt:
A0A2I4EEJ2
A0A833U1R4
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Position
13:607469..611697
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AA seq
369 aa
AA seq
DB search
MTENPKHLLDSVSESTRRPSKIAKTAAQNLSNDEEEQQEAPMGPSPRTQRYLVAIEYIGT
RFSGSQQQPNFRTVVGVLEEAFHKFIGQPVSIFCSSRTDAGVHALSNVCHVDIQRISKRK
PAEVLPPHEPTVVRRAVNHFLQKNEGDIMVIDVQCVPADFHARFKAQERTYFYRLLSGPE
PLSTFERDRAWHVPEELDILAMQEACKVLVGHHDFSSFRAAGCQAKSPIRTLDELNVSEV
VSTPYFPSIVERRQNNLTTEDLHASSNKSESDLPVSSISIDDRASGFNGEASLGFGIRRR
HRCFVVTARARSFLYHQVRLLVGLLKAVGTGTLTISDVERILNAKSVTAASPMAPACGLY
LGHVKYDLP
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaatcccaagcacttgctagacagtgtctccgagtctacccgtaggccatct
aaaatcgcaaaaaccgccgcccaaaacctcagcaacgacgaagaggaacagcaagaagcg
cccatgggcccaagccctagaacccaacgatacctggttgcgatcgagtacattgggact
cgtttctccgggtctcagcagcaacctaacttccgtaccgtcgttggcgttcttgaggaa
gcttttcataaatttattggccagccagtttcaattttttgttcaagtcgtactgatgca
ggagtgcatgccttatcaaatgtttgtcatgtagatattcaacgcataagcaaaaggaag
cctgctgaagtgttaccacctcatgaacctactgtggtcagaagagctgtgaaccatttc
ttacagaagaatgaaggtgatataatggtgattgatgttcaatgtgttccagctgatttc
cacgctagattcaaagctcaagagcgcacgtacttctaccgcttgctttctgggccagaa
cctttgtcgacctttgagagggacagagcgtggcatgttcctgaggagttagatatactt
gctatgcaggaagcatgcaaagttcttgtcgggcatcatgacttcagttcctttagagca
gctggttgtcaggcaaaatcaccaattagaactttagatgaactcaatgtttctgaggta
gtttcgactccatattttccgtccatagttgaaaggagacagaacaatctaaccacagaa
gatcttcatgcaagctcgaacaagtctgagagtgacctgcctgttagttctatttccatt
gatgatagggcaagtggctttaatggtgaagcttctcttggatttggcataagaagaagg
catcgttgctttgtggtaactgcacgtgcacgctcttttctttatcaccaggttagactg
ctcgttggtcttctaaaagctgttggaactggaaccttgacaatctcagacgttgaaaga
atccttaatgcaaagagtgtgactgctgcaagtcccatggcccctgcatgtggtctctac
cttgggcatgtgaaatatgatctgccttga
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