Juglans regia (English walnut): 108989269
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Entry
108989269 CDS
T05245
Name
(RefSeq) uncharacterized protein LOC108989269 isoform X1
KO
K24155
rabconnectin-3a
Organism
jre
Juglans regia (English walnut)
Pathway
jre04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108989269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
jre04131
]
108989269
Membrane trafficking [BR:
jre04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108989269
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
108989269
RAVE complex
108989269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_EML
WDR55
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_C
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
108989269
NCBI-ProteinID:
XP_018818361
UniProt:
A0A2I4EG38
A0A833XDH1
LinkDB
All DBs
Position
7:complement(11010277..11033622)
Genome browser
AA seq
2535 aa
AA seq
DB search
MPEPIATVDPIPHLPLPLLPSDPIPPAPTRSSPPGSTIDFLPDFSGYSWVAYSASSLLVI
SHFPSPLSPDEVLIGPIFRQVFELSSAVTAVSWSPVSPSMGELAAAVENCVCLFQHDSAS
SAGSFCWSQNAVLVQCTKVEAVEWTGSGDGIIAGGIEVVLWRNNSKSWEIAWKLKAECPQ
TLVSATWSLEGPFATAAYLSDPQIEGSMVDAFSKCVFVCWSTGKSDYTKAELHHPLSVST
IQWRPLTGRQLNRDGKHSRRQLLLTCCLDGTARLWCEMDNGRVRKTGKDTIDRETTRRSF
CVVAVIEINQALNGTLGMDVYVLWSTEIWGLLKTGDGVDQILSTEGLEHDKAGRCEWLVG
FGPEKLVYFWAIHCLDDISPMRFPRVTLWRRQELQGLEEGECRGTSFSNSKNRLLLNKFV
MLRNRLSGPPILCSLIHLLPSDSLVWSLLHTKASNNIEDTSPSKSRTDGYLSCSASGILN
LGGHAGKILQVAAHPDSCEVELAVSLDSNGLLLFWSLTTISNSILGCPSLLPTWKLYGKL
VTQDSCPKYTCLRWAPSVLNDDLFLLMGHIGGIDCFIVTIHHNKEEHIECHYLFTIPFTG
HGPYEDGPTNIFSIPLPSTCDKTFKYNKFMLLGIWMKGFRALSWEMTFHCSDLSASHCES
NFDTKDGSEGSMWMFEGAFSGKRYRLGVNPCSSHLPDPHYHDQVTSFAVVCPGSLTHKQQ
KLDSTNDMYGSYPAYIMATGCSDGSLKLWRSNTGKPSSPHVPWELVGMFAAHQGPISSIC
LTDCGQKIATVCVERHLNTVSTLHIWHSVHLTCAGTFMLEDTLFLDKGTIALNWLALGNG
QLLLGVCMQNELRVYATRRCGSHNLLSSEKSSKMDIWVCIAFTHTLPPIHDFHWGPKAAP
VVIHDNYFCVSCQWLFHVPKEHKAKCHLNYIEESFPHCDGQANEDILSAVFTDCDIGNFK
QSCASRPSVEMHKKNDFPASSLFIARDRLKCDSGLKIGLWSLPEVVERFSGSLPSYHPET
LLMNIFSGNWKRAYMAVRHLVECLTYYATKMKNTSTKTCCIIPEILLSDYFEGSLFRSST
DKGFQWGGDLTTTSSQFQSSMFQFASDSETFASNNIFPSSSKKSELSGFVETLENLHQLA
AIPDTEKTQIVAITDLLSELSTAQTSAYESLDEPGRRFWVALRFQQLHFFRMIGRSASMK
ELIVDSRLIVWAYHSDSQEILFGSFLPNGPTWQEMRAIGVGYWFTNTTQLRARMEKLARS
QYLKNKDPKDCALLYIALNRLQVLAGLFKISKDEKDKPLVAFLARNFQEEKNKAAALKNA
YVLMGRHQLELAIAFFLLGGDTYSALNVCSKNLGDEQLAIVISQLVEERGGPLQHHLITK
FLLPSTIEKGDYWLASLLEWEMGNYLQSFFHMLGFQINTIAEKSAFSSKHVAFLEPNIGL
YCQMLASKNSLRNAVGEQNTAVLSRWATLMTATALKRCGLPLEALECLSSSMSVIGSRDD
GRWSDDVRSFEILNGILKPSPQDSSNWLSGDAAFQLESHDKLDLALPYFSKLLIEHPSWP
GNIVESVGAGACSKEYEIHEYEELLENFRRKFYRGLSQFDQRFSLAPANVVSMMLVSLCN
HGLLFMGYDILDGSASQDQSQDKRYNVDSFILYPLLRMPLLKATNEISLLFSRFITACSI
TCPQTKLRNIDNDMSANKKSKWLDTWGYFFQGLMPSLWSLRAALRFISSPITKDLMMEPL
IILDLFEFYVHFASAWLQKNSKVLLLMVQPLLITLTNGHAPYEVDVTNMKKLLPQIEELV
AHNLSMDDRGEGFQASNCVQNKLARDMMHSMPEEERWQIIGTCLWQHMSSFVKQKFEKLD
DKCLPGVSIRKLSSRVSYYTNLEYDGNSITEEIRLVSLSLAELLKTTLTHLSSYHVKQLA
SFIQQKVKNGLQVMTLLWLKESSQLQPRDLCEGTVNIEIMKSKDESSIFELLWDICVDSK
IIYEGFEHGKVNLPHSFDQKLSKAWSDKYIGLEVSNTYDGMLQNSSASSESESPAGGLIH
GGPAFPSSWQKDATLTKEVISFKNPKELYKRSGELLEALCVNSIDQRQAALASNRKGILF
FNWEDGSTFSDQSDYIWSIADWPQNGWAGSESTPVPTRVSPGVGLGSERGAHLGLGGATV
GVGSLVRPGRDLTGGGAFGIPGYAGMGASGLGWEIQQDFEEFVDAPPTVENISTRAFSGH
PSRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFDYCGHRFAT
AALDGTVCTWQLEVGGRSNICPTESSLCFNNHASDVTYVSGGSVIAAAGNSSNGVNVVIW
DTLAPPSTSRASIICHEGGARSLAVFDNDIGSGSISPLIVTGGKGGDVGLHDFRYIATGK
SKRNRHADNGESISSSSSSDMQRGITKNVGDQNRNGMLWYIPKAHSGSITKIRTIPNTSL
FLTGSKDGDVKLWDAKRAKLVYHWSKLHERHTFLQPSSRGFGGIVRAAVTDIQVFSHGFL
TCGGDGIVKLVELKQ
NT seq
7608 nt
NT seq
+upstream
nt +downstream
nt
atgccagagccaatagccaccgttgatcccatcccccacctcccccttcccctcctccca
tccgatccgatccctccagctccgacccgctcctctccacccggatccaccatcgatttc
ctcccggacttctccggctactcatgggtcgcctactccgcctcctctctcctagtcatc
tcccacttcccctcccctctctctcccgacgaagtcctcattggcccaatctttcgccag
gtcttcgagctctcctccgccgtcaccgctgtgtcttggtccccggtgtcgccatcgatg
ggagagctagccgctgcagtggagaactgtgtctgcctcttccagcatgactcggcgagt
tccgctggttctttttgttggagccagaatgcagtgcttgtacaatgtacaaaggtggag
gcagtcgaatggacgggctctggggacgggataatagctggtggaatagaggtggtttta
tggagaaacaacagcaagtcctgggaaatagcttggaagcttaaagcagagtgcccccaa
actctggtttctgcaacgtggtcacttgagggacctttcgctacggcagcttatcttagt
gaccctcagattgaaggatcaatggttgatgcatttagcaaatgtgtgttcgtatgttgg
agtactggaaaatctgattacacaaaagctgagctacatcatcctctatctgtgtcaacg
atccaatggaggccattgacaggaagacaattgaatagagatggaaaacattcacggaga
caactgctgctaacatgctgcttagatggaacagcaaggttatggtgtgagatggataat
ggaagggtcagaaaaactggaaaggacaccatcgatcgcgaaaccaccaggcgatctttt
tgtgtagttgctgtaattgagattaaccaggccctgaatggaactctgggcatggatgta
tatgtgttgtggtccacagaaatttggggccttttaaaaactggtgatggagtggaccaa
atattgtccactgagggattggagcatgacaaggcaggtaggtgtgagtggttagttggg
tttggtccagaaaagctggtttatttttgggctatccactgtcttgatgacatctcccca
atgcggtttccccgagttacattatggaggagacaagaattgcagggccttgaagaggga
gaatgtcgtgggaccagtttttcaaattctaaaaacaggctacttcttaataaatttgtt
atgttgaggaaccgcttgtccggtccaccaattctgtgttctttgattcatttattacct
agtgattctttagtttggtcactgttacataccaaggcatctaataatatagaggatact
tctcctagtaaatccaggacggatggctatttatcatgttctgccagtggaattctgaac
ttaggtggtcatgccggaaagatcttacaagttgcagcacatcctgatagctgtgaagtt
gaactggctgtttctctagattctaacggattgcttcttttttggtcacttaccaccatt
tccaacagcattctgggttgtccgtcattgcttccaacatggaagctttatggaaaactt
gtgactcaagattcatgtcccaaatatacatgcttgaggtgggcaccttcagtattgaat
gacgacctgtttctgcttatgggacacattggaggaattgattgctttatagttacaatc
caccacaacaaagaagaacatatagaatgtcactacttattcactatacctttcactggc
catggtccatatgaggatggtcccacaaatatcttttcaattccattgccttctacttgt
gataagaccttcaagtacaataaatttatgcttttggggatatggatgaaagggtttcgg
gctctatcatgggaaatgacctttcattgttctgatctatccgcaagccactgtgaatct
aattttgacactaaagatggctcagaaggcagcatgtggatgtttgaaggtgctttttct
ggtaaaagataccgtcttggcgtaaatccttgctcatcgcatttaccagatcctcactac
cacgatcaggttacaagttttgctgtggtctgtccaggtagtctgactcataaacaacaa
aagctggattcaaccaatgatatgtatggcagttatcctgcatatatcatggccactggc
tgctctgatggaagtttgaaactgtggagaagtaacactggtaagccctcatcccctcac
gtgccatgggagcttgttggtatgtttgctgcacatcaagggcccattagttccatatgc
ttgactgattgtggtcagaagattgcaaccgtctgtgtggaacgtcatctgaatactgtc
agcacccttcatatatggcactctgtacaccttacatgtgcagggacttttatgttagaa
gatacattattccttgacaaaggcaccattgctttaaattggttagctttaggaaatggt
cagttattacttggagtatgcatgcagaatgagttgcgagtatatgcaacaaggcggtgt
ggaagtcacaatttgttgagctctgaaaaatcttcaaaaatggacatatgggtttgcatt
gcattcactcacactcttcctcccattcatgactttcactggggccccaaagctgcacct
gtggttattcatgataattacttctgtgtatcttgtcaatggctgttccatgttcctaaa
gaacataaggccaagtgccatctgaattatattgaggaaagtttccctcattgtgatggt
caagcaaatgaggacattctttctgcagttttcactgattgtgacattggtaatttcaaa
caatcatgtgcgtctcggccatccgtagagatgcataagaagaatgatttccctgccagc
agtttgttcatagcaagggatcgattgaaatgtgattcaggtttgaagattggtttatgg
agcctgccagaagtagtggagaggtttagcggatccttacctagttatcaccctgaaact
ctacttatgaatatattttcagggaattggaaacgtgcatatatggctgtgaggcatctt
gttgaatgtcttacttattatgctactaagatgaaaaacacctccacaaagacctgctgc
ataatcccagagatccttttgtctgattattttgaaggaagtcttttcagaagttcaact
gataaaggatttcaatggggtggagatttgaccacaacatcatctcagtttcagagcagt
atgttccaatttgcttctgattctgaaacttttgcttccaataatatcttcccttcctct
tccaaaaaatctgaacttagtggttttgttgagactcttgagaacttgcatcagctagca
gctatacccgacacagagaagactcaaattgttgcaattactgatcttctcagtgaactt
agtactgcacagacttctgcctatgaaagtcttgatgaacctgggcgaaggttttgggtg
gcgttgaggtttcagcaattacattttttccggatgattggtagatcggcatctatgaaa
gagttgattgttgactctaggttgattgtatgggcataccactctgattcccaagaaatt
ttatttggttcttttctacctaatggaccaacttggcaagaaatgcgggctattggagtt
ggatattggtttactaatacaacacaattgcgtgcacggatggagaaactggcaagatca
caatatcttaaaaacaaagatcccaaggattgtgctctgttatatatagcattgaataga
cttcaagtgttggctggtctttttaaaatcagcaaggacgagaaggataagcctttggtg
gcttttcttgcacggaattttcaggaggaaaaaaacaaggcagctgctttgaagaatgct
tatgttttaatggggagacatcagctagagctggccattgctttctttctgcttgggggt
gatacttattcagctctcaatgtttgctcaaagaaccttggggatgaacagcttgcaata
gtaatttctcagcttgttgaggagcgtggtggaccattacagcatcatctaataacaaag
tttttgcttccatcaaccattgagaaaggcgactactggctagcaagccttctggagtgg
gaaatggggaattacttgcaatcattttttcacatgcttggtttccagatcaataccata
gctgaaaagtctgcattttcgtccaagcatgttgctttcttggaaccaaatattggtctt
tattgccaaatgctagcctccaaaaatagcttgaggaatgcagtgggggagcaaaatact
gcagttcttagtaggtgggcaactttgatgacagctactgccttaaaaagatgtgggctt
cctcttgaagctttggagtgtctttcatcttccatgagtgtcattgggagtagagatgat
gggaggtggtcagatgatgtcagaagttttgaaattctaaacgggattctaaagccttct
ccacaagattcctctaactggctttcaggtgatgcagcttttcaactggagtcccatgat
aaattagatttggcacttccatacttctcaaaattgctgatagagcatccaagttggcca
ggcaatattgtagaatctgttggagctggtgcatgctcaaaggagtatgagattcatgaa
tatgaggaattactcgaaaacttccgacgtaagttctatagagggctctcacagtttgac
cagaggttttccttggctcctgccaatgtagtcagcatgatgcttgtctcactatgtaat
catgggctcttatttatgggatatgatatattggatggttctgcttctcaagatcagtca
caagataagcgctataatgttgacagtttcatactgtatcctcttctgcgtatgccactg
ttgaaggctactaacgaaatttcccttttattttcacggtttattactgcttgcagtata
acctgccctcaaaccaagttgcgtaatattgacaatgacatgtctgctaacaagaaatcc
aagtggttagatacttgggggtacttctttcaaggccttatgccatcattgtggagttta
agagctgctttgcgatttatttccagccccatcactaaagatctcatgatggaacccctt
atcattcttgatttatttgaattttatgtacattttgcatctgcttggcttcaaaaaaac
tcaaaagttctccttctgatggtgcaacctctcttgatcacgttaaccaacgggcatgct
ccatatgaagttgatgttacaaatatgaagaaactccttccccagattgaagagttagta
gctcataatctatcaatggatgaccgaggagaaggctttcaagcttcaaattgtgtgcaa
aataaacttgctagggatatgatgcattcaatgccagaagaagaaagatggcaaattatc
ggcacttgtttgtggcaacacatgtccagcttcgtgaaacagaaattcgagaaacttgac
gataaatgtttgcctggtgtttccatcagaaaactttcttcccgtgtgtcttattataca
aatttggaatatgatggcaacagtataacagaagagatcaggttggtctcgttgagcttg
gcagagttattgaagaccacacttacacatctttcttcttatcatgttaaacaacttgca
tcatttatacaacagaaagtaaagaatggactgcaggtaatgactcttctatggttaaaa
gaatctagtcaacttcaacccagagacctctgtgagggtactgtaaatattgagatcatg
aaaagcaaagatgaatcatcaatttttgaactactatgggatatctgtgtcgattctaaa
ataatatatgaaggctttgaacatggaaaagtaaatttgccacatagttttgatcagaaa
ctctctaaagcatggagtgataaatatattggtctggaagtatctaatacatatgatggc
atgcttcagaatagttctgccagtagtgaatcggaatcgcctgctgggggtctgattcat
ggtggccctgcttttccaagttcctggcaaaaagatgcaactcttactaaggaggttata
agtttcaaaaaccctaaagaattgtataagagaagtggggagcttttggaggcattgtgt
gtcaactctattgatcaaaggcaagctgcgcttgcaagcaatcggaagggcatactgttc
tttaattgggaagatggttcgactttcagtgatcagtcagactatatctggtcaatagct
gattggccacagaatgggtgggctggttctgaatcgaccccagttccaacacgtgtctct
cctggtgttggtctagggagcgaaagaggtgcacaccttgggttgggtggagcaactgtt
ggtgtgggctctctggttaggcccggcagggacttgactggtggtggagcatttgggata
ccgggttatgccggtatgggagcctctggcttaggttgggagattcaacaagactttgag
gagtttgttgatgcaccacctactgttgaaaatataagcacaagggctttctcaggtcac
ccctctaggccattcttcttggtgggttctagcaatacacacatttacttatgggagttt
ggtaaagacaaagctaccgcaacttatggagtgctgcctgctgcaaatgtccctccgcct
tatgctcttgcatcaatatcagctttgcagtttgactactgtggacacagatttgctact
gcagccttggatggaactgtatgcacatggcagctggaggttggaggaaggagtaacatt
tgtccaacagaatcatctctctgcttcaataaccatgcatcggatgttacttatgtttct
ggcggatcagtcattgctgcagctggaaatagctccaatggtgttaatgtggttatatgg
gatacattggctccaccttcaacctctcgagcttccattatatgtcatgaaggtggagcc
cgctcccttgctgtgtttgataatgatataggaagtggttccatttctcctcttattgtg
actggcggcaaaggtggtgatgttggactccatgacttccggtacattgctactggtaag
agtaagcggaacaggcacgctgataatggtgaaagcatcagctcatcttcaagttctgac
atgcagagagggattactaaaaatgttggggaccagaatcgaaatgggatgctttggtat
ataccaaaggctcactcagggagtatcaccaaaatacgtaccatcccaaatactagtttg
ttcttgacgggaagcaaagatggagatgttaaactttgggatgccaaaagggctaagtta
gtatatcactggtcaaaattgcatgaaagacatacctttctgcaaccaagctctcgaggc
tttggtggaattgttcgggctgctgtaacagacatacaagttttttcacacggttttctt
acatgcggtggagatggcattgtaaagctggtagagctcaaacagtag
DBGET
integrated database retrieval system
