Juglans regia (English walnut): 108989352
Help
Entry
108989352 CDS
T05245
Name
(RefSeq) transcription elongation factor SPT4 homolog 2-like isoform X1
KO
K15171
transcription elongation factor SPT4
Organism
jre
Juglans regia (English walnut)
Pathway
jre03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108989352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
108989352
03019 Messenger RNA biogenesis [BR:
jre03019
]
108989352
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
108989352
RNA polymerase I system
108989352
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
108989352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
108989352
NCBI-ProteinID:
XP_018818456
UniProt:
A0A2I4EGD2
LinkDB
All DBs
Position
16:complement(20913248..20916237)
Genome browser
AA seq
122 aa
AA seq
DB search
MGSDPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDNERVVDCTTPNFT
GIISVMEPSRSWAARWLRIGMENLSLVVTLLQSQRLFQRTCRIYVKMSTCNMRHRNVYEC
GK
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtgatccggcacagattccaacgagcttcgggcatgagctgagggcttgcctt
cgttgccgcctcgtcaaaacctacgaccagtttcgggaatcggggtgcgagaactgtcct
ttctttaagatggacgaggataacgaacgtgtcgttgattgcaccactcctaattttact
gggataatctcggtcatggagccaagtagaagttgggctgctcggtggctgcgaattggt
atggaaaatttgtccctggttgttacactcttgcagtctcagaggctcttccagaggact
tgcagaatttatgtgaagatgagcacgtgcaatatgcgccaccgaaacgtatatgaatgt
ggaaagtag
DBGET
integrated database retrieval system
