KEGG   Juglans regia (English walnut): 108989531
Entry
108989531         CDS       T05245                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like
  KO
K10752  histone-binding protein RBBP4
Organism
jre  Juglans regia (English walnut)
Pathway
jre03082  ATP-dependent chromatin remodeling
jre03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    108989531
   03083 Polycomb repressive complex
    108989531
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:jre03036]
    108989531
Chromosome and associated proteins [BR:jre03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     108989531
  Histone modification proteins
   HAT complexes
    HATB complex
     108989531
   HDAC complexes
    Sin3A-HDAC complex
     108989531
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     108989531
    PRC2.2
     108989531
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     108989531
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    108989531
  Chromatin remodeling factors
   NuRD complex
    108989531
   NuRF complex
    108989531
   NuRF complex (fruit fly)
    108989531
SSDB
Motif
Pfam: CAF1C_H4-bd WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_EML_2 WDR55 WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 eIF2A Beta-prop_RIG_1st WD_LRWD1 MIOS_WD40 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_SPT8 NBCH_WD40 WD40_MABP1-WDR62_1st Phage_CRI Beta-prop_TEP1_C
Other DBs
NCBI-GeneID: 108989531
NCBI-ProteinID: XP_018818713
UniProt: A0A2I4EH34 A0A833XRH4
LinkDB
Position
5:1479143..1483672
AA seq 423 aa
MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARQYDDDRTDVGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE
GYGLSWSKFKQGHLLSGSDDAQICLWDISATPKNKSLDAMQVFKVHEGVVEDVAWHLRHE
YLFGSVGDDQHLLIWDLRTPSVSKPVHSVIAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKISTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPSEDWVVASVAEDNILQIWQMAENIYHDEDDLPEEST
KAT
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgggaaaagacgaggaggagatgagaggggagatagaggagaggctaataaacgaggag
tacaagatctggaagaagaacaccccgttcctctacgatctggtcatcacccacgccctt
gagtggccttctctcaccgtcgagtggctaccggaccgggaggagccccccggaaaggac
tattccgtccagaagatgatcctaggcacccacacctccgagaatgagcccaattacctc
atgcttgcccaggtccaactccctctcgaggacgcagagaacgacgcacgacaatatgac
gacgaccgcaccgatgtcggtggcttcggctgcgccaatggaaaggtgcaaataatccag
caaataaatcatgatggagaggtcaatcgtgctcgttatatgcctcaaaacccgtttatt
attgccactaagacagttagtgctgaagtttatgttttcgattatagcaaacacccgtct
aagcctcctctagatggtgcatgcagccctgacttacggttgaggggccacagcactgaa
ggatatggtttatcgtggagtaagtttaagcagggccatttgctgagtggctctgatgat
gctcagatatgcttgtgggatattagtgcaactccaaagaacaagagccttgatgccatg
caagtttttaaggttcatgaaggtgttgtagaagatgtagcatggcatctgaggcatgaa
tacttatttggttcagtaggtgatgatcagcacctgttaatatgggatctccggactcca
tcagttagcaagcctgtccactctgttattgctcatcaaagtgaggtaaactgcttagct
ttcaatccctttaatgaatgggttgttgcaacgggctctactgataaaactgtgaagttg
ttcgatctacgcaagatcagcactgcactccacacctttgattgtcacaaggaggaggtc
ttccaagttggctggaatccaaaaaacgagactatcttagcttcttgttgtcttggtagg
agactcatggtgtgggatcttagcaggattgatgaagagcaaacaccagaggatgctgaa
gatggaccgccggagttactttttattcatggtggtcacacgagtaaaatatctgatttt
tcctggaacccaagtgaagactgggttgtcgctagtgtagctgaagataacatacttcaa
atctggcagatggccgagaacatctaccatgatgaagatgatttaccggaagaatctaca
aaggctacctag

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