Juglans regia (English walnut): 108989816
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Entry
108989816 CDS
T05245
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre00040
Pentose and glucuronate interconversions
jre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108989816
Enzymes [BR:
jre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
108989816
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
108989816
NCBI-ProteinID:
XP_035542529
UniProt:
A0A6P9E4U2
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All DBs
Position
16:19379434..19381937
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AA seq
443 aa
AA seq
DB search
MAKVNKNIVLLRVLLVSFVVIIPTLHAAVDNFVPLDGYWKQRAVEARKASLEAYDPHPEE
ITSDLNFHVNKVLTGSNNTRRNLKKNTGPCRATNPIDRCWRCDPNWAKNRKKLADCVLGF
GRNTVGGKYGPYYVVTDSSDDDLVNPKPGTLRYAVTQDGPLWIIFERSMIIRLHEELIMT
SNKTIDARGANVRIVYGAGITLQFVQNVIIHNIHIHNIYAGSGGLIRDAMNHVGIRTPSD
GDGISIFGSSNIWIDHVSMSQCQDGLIDAIMGSTAITISNCHFTNHNEVMLFGASDSFSG
DEIMQITVAFNHFGRGLVQRMPRCRWGFVHVINNDYTHWLMYAIGGSSHPTIISQGNRFI
APPNLAAKEVTKRDYASESEWSNWTWRSDGDLMMNGAFFVQSGTEFDKKPFSRLDVIKSR
PGTYVKRLTRFSGTLSCKPGLPC
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagttaacaaaaatattgtcttgctccgtgtgttgttggtgtcatttgttgtg
attatcccgacccttcatgctgccgttgacaatttcgttccattggatggttactggaag
caacgagctgtggaggccagaaaggcttcccttgaggcctatgatccacatcctgaggaa
atcactagcgacctcaactttcatgtcaacaaggttctgactgggagcaacaacacgaga
agaaacctaaagaagaacacgggtccatgcagggccaccaaccccattgatagatgctgg
aggtgtgacccaaactgggccaaaaatcgcaagaagctagctgactgcgtgctcggcttt
ggccgcaacactgttggtggaaaatatggtccttactatgttgtgactgattcctcggac
gacgacctagtgaatcccaagcccggaaccctccgctatgccgttacccaggatgggccc
ctctggattatctttgaacgcagcatgatcattaggctccatgaggagttgatcatgacc
agcaacaaaaccattgatgctaggggagccaatgtgcgcatcgtttatggtgccggcatc
accctccagttcgtgcaaaatgtgatcatccataacatccatatccataacatttacgcc
ggtagtggtggactcatcagggatgctatgaaccatgtcggtatcaggacacctagtgat
ggcgatggtatctccatctttggctcatccaacatctggattgaccatgtttccatgtcc
caatgccaagatggtctcattgatgccattatgggatcaactgctataacaatctccaac
tgccattttaccaaccacaatgaggtgatgttgtttggtgcaagcgatagcttttctggt
gacgagataatgcaaatcacagttgcctttaatcactttggaaggggattggtgcagcga
atgccaaggtgccgatgggggttcgtccatgttattaacaatgactatactcattggctt
atgtatgccattggtggtagtagccatcctaccattatcagtcagggtaacagattcatt
gctcctccaaacctggctgctaaagaggtgaccaagagagactatgcatctgagagtgag
tggagcaactggacatggaggtccgatggagatttgatgatgaatggtgcgttctttgtt
caatcagggactgaattcgacaaaaaaccattctcaaggttggatgtgatcaaatcgaga
cctggaacctatgtgaaaagactcacacgcttctcgggtacacttagctgcaaaccaggc
ttaccctgttag
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