Juglans regia (English walnut): 108989854
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Entry
108989854 CDS
T05245
Name
(RefSeq) eukaryotic translation initiation factor 4G-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
108989854
03012 Translation factors [BR:
jre03012
]
108989854
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108989854
mRNA cycle factors
Stress granule specific factors
108989854
Translation factors [BR:
jre03012
]
Eukaryotic type
Initiation factors
eIF-4
108989854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Rep_fac_C
DUF5017
Motif
Other DBs
NCBI-GeneID:
108989854
NCBI-ProteinID:
XP_018819162
UniProt:
A0A2I4EIE0
A0A833XR17
LinkDB
All DBs
Position
5:1724107..1732393
Genome browser
AA seq
1920 aa
AA seq
DB search
MSYNQSRPDKSETTRYRKSERRSTSSNQQRGSSGAYGKGGGPAPSPSYNQSFNGSFKKNN
NNVQGGQSRASVPTVNSSSSESSNPSTPRGTVLQNGSHVQPQLHGAASDVRVTSTAAKPA
ESLAPQRITQAFPKAPTSQSASVSSDLTAPATPAKSPGDASKAFPFQFGSISPGFMNGMQ
VPARTSSAPPNLDEQKRDQARHDSFRSVPPLPVPPMPAPPAPKQLPRKDVATAIQSNTGD
AHSVPKARKDAQVSPAPPASQPQKPSVRPMTGMSMQMPFHQSKGSVQFGGPNQQIQSQSM
AAASLQMPLTVPLAMGNASQVQQTMYVPGLQPLPMQTQGLIHQGQGLSFTTQMGPQLPPQ
LGNMGFMTPQYPQQQGGKLGGPRKTTVKITHPDTHEELNFDKPADSYSDVGSSGPRSHPN
VPPHSQPIPSYGPTHPINFYPPNSYNASSIFYRSPSSVSLTSSHIPPNSQASRFNYPVPQ
GPQNLAFMNPPAHNPLPVNKTGTQMHGVADPPNMEQSRDVHNIISSAPSTTKPVTVKPAT
GSYIGEKATDSLLPNSPRVEKIESPKLVRPSVESSSSHPQRDSEICSEISLRQPKPSTES
LAFKSLSVETNQPVSVSDAGLPEGLVSNHSTLASVSPTEESAPVVPNNEGRRREAVDRSN
SIKDQKKPGKKGLIQSQLQVGSQSASTSVLPSTSFNGGVLGAVLAKANATPVTNEVVSSS
QQSPPTVPAAATDASELKVDSVGEGVTSVSSEISGARIIVDTSETVCHANLDKSDSQDEQ
LAHEAAGKYEQGESRLPEGPKHINSSQISSEPILLKSSEGKQSGQESVLKEITVSDEVLT
LKAEQRGLDEPVRCHTGINRMTDNLEILNSKVLGSTVGGSPNGEKISTLDASSSRSNSLG
SSEIVMISGMSDQQSAPILTPDLAEATSKHGGEGAEDIGGLISSAASGSKDKPVLDLNRA
KSTAKAKKKRKEILQKADAAGSTSDLYNAYKGPEEKKETVVSTECTESTSDVHVKEAPAD
AVEVDAIASEKRGLLEAEPDDWEDAADISTPKLEVSDNGLQIHGRVDNYDNDGDGITAKK
YSRDFLIKFSEQCTDLPEDFEISADIAEAVMSANFNSSHIVERDSYPSPGRIIDRASGGS
RTDRRSSGMVEEDKWSRQPGNFGSGRDVRQDPGYGSNAGFRPGSGGNHGVLRNPRGQTPM
QYAGGMFFGPSMGPQGGMPRNNPDADRWLRGTNIQQKGLIPSPQTPLLMMHKAEKKYKVG
KVTDEEQAKQRQLKAILNKLTPQNFEKLFEQVKAVKIDNAMTLTGVISQIFDKALMEPTF
CEMYANFCCHLAVELPDFNNEENEKITFKRLLLNKCQEEFERGEREQEEANKADEEGDIE
QSAEEREEKRVQARRRMLGNIRLIGELYKKRMLTERIMHACIHKLLGQYQNPDEEDVEAL
CKLMSTIGEMIDHPKAKEHMDAYFDGMKLLSTNMNLSSRVRFMLKDALDLRKNKWQQRRK
VEGPKKIEEVHRDAAQERQAQSNRLSRGLSMNQSVRRTPMDFVPRGSTMLSSPNTQMGGF
RGVSTPVRGFGNQDIRLEERQPYEARMLSVSLPQRPTMGDDSITLGPQGGLGRGMSIRGS
PSIPSAAVADVSPAPADSRRMTAGLNGYSTASERTTYGTREDLNPRYNSDRIAAPAAYDH
LSSQERNVNYGNRDLRNPDRSLDRSLATSPPARGQGTTSQNVPSEKEWPEDRLREMSMAA
IKEFYSARDEKEVEFCIKDLNSPSFHPSMVSLWVTDSFERKHMERDLLAKLLVNLSKSRD
GLLSQTQLIKGFESVLTTLEDAVNDAPRAPEFLGGIFAKVITENVIPFREIGRLIHKGGE
EPGHLLEVGLAADVLGSILEIIKSEKGDSVLNEMQASSNLRFEDFRPPDPNRSRKLDKFL
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacaatcaatcgaggccggataagagcgagacgacacggtataggaaatccgag
aggcgatccacgagctccaatcagcagcggggctcctcaggcgcttacggtaagggcggc
gggcccgccccttctccgtcatacaatcaatccttcaacggcagtttcaagaagaataac
aataatgtacaaggagggcaatctagggcaagcgtgcccaccgtgaactcatcttcgtcg
gagtctagtaatccttctacaccgcgtggtactgttctgcagaatggttcccatgtacag
ccccaattacatggagcagcatctgatgtgcgggttacaagcacagctgccaagccggct
gagagtttggctcctcagagaatcacccaagcttttccgaaggctccaacttctcaatct
gcctccgtgagctctgacttgacagctcccgcaacacccgcaaagtcccccggagatgca
tccaaagcattcccctttcagtttgggtccataagtcctggtttcatgaatgggatgcag
gttcctgctcgaactagctcagcgcccccaaatttggacgagcagaaacgagaccaggca
cgccatgattcttttagatctgttcctccgttgccagtgcctccgatgccagctcctcct
gcacctaagcagttaccgagaaaggacgtagctactgcaatccaatctaatactggggat
gctcattcagtgcccaaggcaagaaaggatgcacaagtctcacctgcaccgccagcaagc
caaccacagaagccatctgttcgtcctatgactggtatgtccatgcaaatgccatttcac
cagtcaaaaggttcggtgcagtttggtggccccaaccaacagattcaatcccagagtatg
gcagctgcttcacttcaaatgccattgactgtacctttagctatgggaaatgcatcccaa
gtgcaacagactatgtatgttccaggtctccaaccccttcccatgcagactcaaggactt
attcatcaaggccaagggctgagtttcacaactcaaatgggtcctcagttaccccctcag
ttgggcaatatgggattcatgactccacaatacccccagcagcagggtgggaaacttggt
ggtcctcgtaaaactacagttaaaattacacatccagacacacatgaagagttgaatttt
gataaaccggcagattcctattcagatgttgggtcatcaggccctaggtctcaccctaat
gtgcctcctcattcccagcctattccatcatatggacctactcatcctattaacttttat
cctcccaattcttacaatgccagttctatattttatcgatccccaagttctgtttcttta
acaagtagccacataccacccaattctcaagcctcaagatttaattatccagttccccag
ggtccccaaaacttggcattcatgaatccacctgctcataatcccctacctgtaaataag
acggggacccaaatgcatggtgttgcagatccaccaaacatggaacaatctcgtgatgta
cataacataatctcctctgctccatcgacaacaaaaccagttacagttaaacctgctact
ggttcttatattggagaaaaggctacagactcattgctgccaaatagtccacgtgttgaa
aagattgaatctcctaaacttgtgaggccatctgtggaatctagctcatcacatcctcaa
agagattctgagatttgttcagaaatatctttacggcagcctaaacctagcactgaatca
ttggcgttcaagtccttgtcggtggaaacaaatcagccagtgtcagtatcagatgctggt
cttcctgagggccttgtatctaatcactctactttggcttcagtttcaccaactgaggaa
tctgcaccagttgtgcccaataatgaaggcagaagaagggaagctgttgacaggtcaaac
tctattaaagatcagaaaaagccaggcaagaaaggacttatccaatcacagctgcaggtt
ggtagccaatctgcgtcaacctcagtcttgccttctacatcttttaatggtggagtttta
ggagctgtactggctaaagcgaatgccacacctgtgactaatgaagtagtttcttcatct
cagcaatcgccaccaactgttcctgctgctgctactgatgcttctgaattaaaggttgac
agtgttggcgaaggtgtcaccagtgtctcatctgaaatttctggcgccagaataattgtt
gatacctctgaaactgtttgtcatgctaatctagataaatccgattctcaggatgaacaa
ttagcccatgaagctgcgggaaaatatgaacaaggagaaagcagattgcctgaagggccc
aaacatattaacagtagtcagatatcttcagaacctattttgttaaaatcttctgaggga
aaacaatctggacaggagtctgttcttaaggaaattactgtaagtgatgaggttctaact
ttaaaggctgaacaaagggggctggatgaacctgtgaggtgtcatacaggaatcaacagg
atgactgataatctagaaattttgaactccaaggttttgggttccacagttggtggaagt
cctaatggtgagaagatctcaactttggatgcctcgtcaagcagaagcaatagcttgggc
agtagtgaaattgttatgatatctgggatgtcagatcagcagtctgctcccattttgaca
cctgatcttgcagaagctacttcaaaacatggaggggaaggtgcagaggacattggtggt
ttgatctcttctgcagcatcaggttccaaagataaacctgtccttgatctgaacagggca
aagagtactgctaaagcaaagaagaagagaaaagaaattcttcaaaaggctgatgctgct
gggtcaacgtctgatctttataatgcatataagggtccagaggaaaagaaagaaactgtt
gtgtctacagaatgtactgagagtacttctgatgtgcatgtgaaggaggcacctgctgat
gctgtcgaagtagatgccatagcgagtgaaaagagaggactgcttgaagctgaacctgat
gattgggaagatgccgctgacatatctaccccaaaattagaagtttcagataatggacta
cagatccatggaagagtggataattatgacaatgatggagatggaattacagccaaaaag
tattccagagatttcctcattaaattttcggagcaatgcactgatcttccagaagatttt
gagatttcagcagatatagcagaggctgtgatgagtgctaatttcaatagctctcatatt
gttgagcgcgattcataccctagtcctggaagaataatagatagagcgagtgggggatct
cgaacagaccgccgtagtagtggcatggtcgaggaagacaagtggagcagacaacctggt
aattttggttcagggcgggatgtgcgtcaggatcctggttatggaagtaatgcaggtttt
cggcctggctcaggtggcaatcatggtgttctcaggaacccacgtggacagacacctatg
cagtatgctggaggaatgttctttgggccatccatgggtcctcagggaggaatgcctaga
aataatcctgatgctgacaggtggttgcgtggtaccaatattcaacaaaaaggtttaatt
ccttcccctcagactccattactgatgatgcacaaagctgagaagaaatataaagtgggt
aaagtgacagatgaggaacaggcaaagcaaaggcaattgaaagctattttaaacaagctt
actcctcagaacttcgagaaactttttgagcaagtaaaagcggttaaaattgacaatgca
atgactcttactggcgtcatctcacagatatttgacaaagctttaatggagcctactttc
tgtgagatgtatgccaatttctgttgtcatctggctgtggagttgcctgatttcaacaat
gaagaaaatgagaagataacttttaagagattgcttctgaataagtgccaggaggaattt
gagagaggggaaagagagcaagaagaagctaataaagctgatgaagagggtgacatcgag
cagtctgcagaggaaagagaagaaaagagagttcaggctcggagacgaatgttgggtaat
attagattaattggggagttgtacaagaagagaatgttaactgagcgaataatgcacgca
tgcatccacaagttactgggccagtatcagaatcctgatgaagaagatgttgaggctttg
tgcaaattgatgagtaccattggagagatgatcgatcatcccaaagctaaagagcatatg
gacgcatattttgatggaatgaagttgttatctactaatatgaacttatcttctagggtc
aggttcatgttgaaggatgcattggatttgagaaagaataaatggcaacagagaaggaaa
gttgaagggccaaaaaagattgaggaagtgcacagggatgctgctcaagaacggcaggca
caatccaacaggttgagccgtgggttaagcatgaaccagtcagtcaggagaacacctatg
gatttcgttccaagaggatcaacaatgttgtcttccccaaatacccagatgggtggtttc
cgtggagtttctactccggttcgtgggtttggcaatcaggatattcggttggaggaaaga
cagccttatgaggctaggatgttgtcagtttccttgcctcagaggccaacaatgggtgat
gattctattactctgggacctcaaggtggccttgggagaggaatgtcaatcagaggatca
ccatcaattccaagtgctgctgtagctgatgtatctccagcccctgcagattccagaaga
atgacagctggtttgaatggttacagcactgcatcagagcggacaacatatggcacaagg
gaggatctcaatccaagatataattctgatagaattgcagctccagctgcttatgaccac
ttgagttctcaggagcgtaatgtgaattatggtaacagagacctgaggaatccggaccga
agtctcgatagatctcttgctacatcaccacctgcacgagggcagggtacaacttctcaa
aatgtcccttcagaaaaagagtggcctgaagatcgccttcgggaaatgtccatggcagca
attaaagaattttacagtgccagagatgagaaagaagttgaattttgcatcaaagatttg
aattccccgagcttccatccctcaatggtatctttatgggtcacagactcttttgagagg
aagcacatggaaagggatcttttggctaagcttctagtcaatctttcgaagtctcgggat
ggcctgttgagtcaaacccagctcattaaagggtttgaatctgttctgactactctggag
gatgctgtaaatgatgccccaagagcaccagaatttcttggtggcatctttgccaaagtc
attacagaaaatgtgatcccttttagagagattggacggttaatacataaaggtggagag
gagccgggtcatcttctggaagttgggcttgcagcagatgttcttggaagcatcttggaa
ataataaaatcggagaagggggattctgtcttaaatgagatgcaggcaagctccaatttg
cgttttgaggattttcggcccccagatcctaacagatcgaggaaattagataaatttctt
tag
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integrated database retrieval system
