Juglans regia (English walnut): 108989935
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Entry
108989935 CDS
T05245
Name
(RefSeq) DNA mismatch repair protein MSH4
KO
K08740
DNA mismatch repair protein MSH4
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
jre03036
]
108989935
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Meiosis-specific proteins
Others
108989935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_27
AAA_14
AAA_22
Motif
Other DBs
NCBI-GeneID:
108989935
NCBI-ProteinID:
XP_018819253
UniProt:
A0A834D604
A0A2I4EIM9
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All DBs
Position
2:complement(18651192..18672735)
Genome browser
AA seq
792 aa
AA seq
DB search
MEDDGGERSSFVVGLIENRAKEVGVAAFDLRLASLHLSQYIETSSSYQNTKTLLHFYDPL
VIIVTPNKLAPDGMVGVSELVDRFYATVKKVVMARGCFDDTKGAVLIKNLAAKEPSALGL
DSYYKQYYLCLAAAAATIKWIEAEKGLIITNRSLSVTFNGSFDHMNIDATSVQNLEIIEP
LYSSLWGTSNKKQSLFHMLKTTKTIGGTRLLRANILQPLKDIETINARLDCLDELMSNEQ
LFFGLSQVLRKFPKETDRVLCHFCFKPKKITNEVLGIDYARKSQMLISSIILLKTALDAL
PLLSKVLKDAKSFLLANIYKSVCENEKYASIKKRIGEVIDEDVLHARVPFVARTQQCFAV
KAGIDGLLDLARRSFCDTSEAIHNLANKYREDFKLPNLKLPFNNRQGFYFSIPQKDVQGK
LPNKFIQVLKHGNNIHCSTLELASLNVRNKSAAAECYIRTEVCLEALLDAIREDVSLLTL
LAEVLCLLDMIVNSFAHTISTKPVDRYTRPEFTDNGPMAIDAGRHPILESIHNDFIPNNL
FLSEASNMVIIMGPNMSGKSTYLQQVCLIVILAQIGCYVPAHFSTLRVVDRIFTRMGAVD
NLESNSSTFMTEMKETAFVTQNVSERSLIVMDELGRATSSSDGFAIAWSCCEYLLPLKAY
TIFATHMENLSELATIYPNVKILHFQVDIRNNRLDFQHQLKDGPRRVPHYGLLLAEVAGL
PSSVIETARSITSRIAEKEVKRMEINYMQYHPIQMAYRVAQRLICLKYSSQDEDSIRQAL
QDLKEQYADGSL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgacggaggagagagatcgagctttgtggtcggtcttatcgagaacagagct
aaagaagttggagttgctgctttcgacttgaggttggcttcattgcatctttctcaatat
attgaaactagcagctcctatcagaatacaaaaactttgctgcatttctatgatccattg
gttatcattgttactccaaacaagctggcaccagatggtatggttggagtttcggagttg
gtggatagattttatgctacagtcaagaaggttgtaatggcccgtggttgctttgatgat
accaagggtgctgtgctgattaaaaatctagctgccaaggagccttctgcacttggtttg
gatagttattacaagcagtattatctctgtttggctgctgctgccgctactattaagtgg
atagaagcagaaaagggacttattattacaaaccgctcattatcggttacctttaatgga
tcatttgaccacatgaacattgacgctaccagtgtccaaaatttggaaattattgagcca
ctttactcaagcctttggggcacaagcaacaaaaagcaaagtctattccacatgctaaag
acaacaaaaacaattggagggactagacttcttcgtgccaatattttgcagccattaaaa
gatattgaaactatcaatgctcgccttgattgtctggatgagctgatgagcaatgaacag
ctattttttggactctctcaggttctgcgtaaatttccaaaagaaactgatagagtacta
tgtcacttctgctttaagcctaagaaaattacaaatgaggtcttgggtattgattatgct
agaaagagccaaatgttaatctcaagcattattctccttaaaactgctttggatgcgcta
cctttactctcaaaggtacttaaggatgcgaaaagttttcttcttgcaaacatttacaag
tctgtatgtgaaaatgagaaatatgcatcaattaaaaagaggattggagaggttattgat
gaagatgtgcttcatgcacgggttccatttgttgctcgcacacagcagtgttttgctgtc
aaggctggaattgatggacttttggatttagcaaggaggtccttttgtgatactagtgaa
gctattcataatcttgcaaacaagtatcgtgaagatttcaaattgcccaatttgaaactt
ccctttaacaataggcaagggttctactttagcattccacagaaggatgttcaaggaaag
cttcctaacaagttcattcaggtcttgaaacatggcaacaatatacattgctcaactctg
gaacttgcttctttgaatgttagaaataagtctgcagctgcagagtgctatatacgaaca
gaagtttgcctggaagcacttttagatgccatacgggaggatgtctctttgcttactcta
cttgcagaggtattatgcctgttagatatgattgtcaactcatttgctcatacaatatcc
actaagcctgttgatcgatatactagaccagaattcacagacaatggcccaatggcaatt
gatgctggaaggcatcctatcctggaaagcatacacaatgacttcatccccaacaatctc
tttctctcagaagcatcaaatatggtgattataatgggcccaaacatgagtggaaagagc
acttatcttcaacaagtgtgtcttatagttattcttgctcagattggttgctatgttcct
gctcacttctcaactttaagggtggtcgatcgtatatttacaaggatgggtgcagtggat
aatcttgaatcgaactccagtacattcatgacagagatgaaagagacagcttttgtaaca
cagaatgtctctgaaaggagtctgattgtaatggatgagcttgggagggctacttcttcc
tctgatggatttgcaattgcatggagctgctgcgagtatctattaccactgaaagcgtat
actatatttgctactcatatggagaatctatcagaattagcaaccatctatccaaatgtg
aaaattcttcacttccaggttgacattagaaacaaccgtctagatttccagcatcaactc
aaggacggtccaagacgtgtaccacactatggcctattgttggcagaagtggcaggttta
ccaagctcagttattgaaacagccagaagcatcacatcccggatcgctgaaaaggaagtg
aagaggatggaaataaactacatgcagtatcatccaatccagatggcttaccgtgttgct
cagcggctgatatgcttgaagtactccagccaagacgaggactcaattcgacaagcattg
caggatctcaaagagcagtatgctgatggaagtctatag
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