Juglans regia (English walnut): 108989940
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Entry
108989940 CDS
T05245
Name
(RefSeq) rRNA 2'-O-methyltransferase fibrillarin 2-like
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108989940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jre03009
]
108989940
Ribosome biogenesis [BR:
jre03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
108989940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
PCMT
FtsJ
Methyltr_RsmB-F
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
108989940
NCBI-ProteinID:
XP_018819261
UniProt:
A0A2I4EIN5
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All DBs
Position
2:complement(17954552..17959053)
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AA seq
314 aa
AA seq
DB search
MRPPRGRGGGGGGGGGFRGRGDGGFRGRGDGGRGRGRGGGGRGGDRGGAMRGRGGRGAGG
RGRGGGRGGMKGGSKVVVEPHRHGGVFIAKGKEDAIVTKNLVPGEAVYNEKRISVQNEDG
TKVEYRVWNPFRSKLAAAIIGGVDEIWIKPGARVLYLGAASGTTVSHVSDIVGPTGVVYA
VEFSHRSGRDLVNMAKKRTNIIPIIEDARHPSKYRMLVGMVDVIFSDVAQPDQARILALN
ASYFLKAGGHFVISIKANCIDSTQPAEAVFQSEVNKLKQDQFKPFEQVTLEPYERDHACV
VGGYRVPKKSKIAA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagacctcctcgaggacgtggtggtggtggtggtggtggtggtggattcaggggcagg
ggtgatggaggattcaggggcaggggtgatggaggcagaggtagaggcagaggtggtgga
gggagaggtggcgacagaggtggtgccatgagaggccgtggtggccgaggcgctggtgga
agaggccggggtggaggtcgaggtggaatgaagggtggaagtaaggttgtggttgagcct
catagacatgggggagtattcattgctaagggtaaagaagatgctattgttactaagaat
ttggtacctggtgaagctgtttacaatgagaaaaggatctctgtacagaatgaagatggc
acaaaagtggaatacagagtctggaacccatttcggtcgaagttggctgctgccattatt
ggtggtgttgatgagatttggattaaacctggtgctcgggtcctctatcttggggctgct
tcaggaaccactgtctcccatgtgtctgacattgttgggcctactggagtggtttatgca
gtggagttttctcatagaagtggtagggacctggttaacatggcaaagaagcgcactaat
attatccccatcattgaagatgctaggcatccgtccaaatatcgaatgctagttggcatg
gtggatgtaatattttctgatgttgcacagcctgatcaggcaaggattctagcattgaat
gcatcatattttcttaaagctggaggccattttgtaatttctatcaaggccaactgcata
gattctacacaacctgcggaggccgtattccagagtgaagtgaacaagctaaagcaggat
cagttcaagccatttgaacaagttacgcttgaaccttatgagcgtgaccacgcctgtgtg
gttgggggctatcgtgtcccaaagaaatccaaaattgctgcctag
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