Juglans regia (English walnut): 108990252
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Entry
108990252 CDS
T05245
Name
(RefSeq) cullin-4-like
KO
K10609
cullin 4
Organism
jre
Juglans regia (English walnut)
Pathway
jre03420
Nucleotide excision repair
jre04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108990252
09124 Replication and repair
03420 Nucleotide excision repair
108990252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jre04121
]
108990252
03400 DNA repair and recombination proteins [BR:
jre03400
]
108990252
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
jre04147
]
108990252
Ubiquitin system [BR:
jre04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
108990252
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
108990252
TCR (transcription coupled repair) factors
Cul4-CSA complex
108990252
Exosome [BR:
jre04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108990252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
108990252
NCBI-ProteinID:
XP_018819695
UniProt:
A0A2I4EJX2
A0A834CW65
LinkDB
All DBs
Position
4:23993820..24015654
Genome browser
AA seq
814 aa
AA seq
DB search
MSLPTKRSSTTSSDATFSPPQFPPMKKAKSQALPLDSKNGLHHQDFTSTTNNNVILFDPS
SVALDEDLKSDDSSAPSRSVAANLSRKKAQPPQPTKKLVIKLVKAKPTLPANFEEDTWAK
LKSAISAIFLKQPNPIDSEILYQAVNDLCLHKLGGNLYQRIEKECELHISSALKSLVGQS
PDLVVFLSLVERCWQDLCDQMLLIRGIALYLDRTYVKQTPNVRSLWDMGLQLFCKHLSWS
PEVKHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFSALGIYMESFEKPFLDCTSEFYAA
EGMKYMQQSDVPDYLKHVESRLHEEHERCLIYLDASTRKPLIATAEKQLLERHISAILDK
GFTMLMNGDRIEDLRRMYSLFSRVNALESLRLALSSYIRGSGQGVVMDEEKEKDMVSSLL
EFKALLDKIWDESFSKNEAFCNTIKDAFEHLVNLRQNRPAELIAKFLDEKLRAGNKGTSE
EELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQ
FTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPH
ELNVYQDIFKEFYLSKYSGRRLMWQNSLGHSVLKAEFPKGKKELAVSLFQTVVLMLFNDV
EKLTFQDIKDSTGIEDKELRRTMQSLACGKVRVLQKLPKGRDVEDDDSFVFNDGFTAPLY
RIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKF
PIKPADLKKRIESLIDREYLERDKSNPQIYNYLA
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccccaccaaacgctcatccacaaccagtagtgacgccaccttttccccccct
cagttcccccctatgaagaaggccaagtcccaagctctccccctcgactccaaaaacggc
ctccaccaccaagacttcaccagcaccaccaacaacaacgtcatccttttcgatccctcc
tccgtggccctcgacgaagatctcaagtccgatgattcctccgccccctctcgctctgtt
gccgccaatttgtccaggaaaaaggcccagccgccccagcccaccaagaagctcgtcatc
aagctcgtcaaagctaaaccaacacttcctgcaaattttgaagaggatacatgggcaaag
ctgaagtcggctatatctgctatatttttaaagcaaccaaatcctattgactcagagata
ctttatcaggctgttaatgatctttgtctgcacaaattggggggaaatctttatcaacga
attgaaaaggagtgtgaattgcacatatcttctgcgttgaaatcgttggtaggccaaagc
ccagatttggtggttttcttatcacttgtcgagagatgctggcaggatctttgtgatcaa
atgttgttaattcgcggtatagccttgtatctggatagaacatatgtgaagcaaacacct
aatgtacgatcactgtgggacatgggattgcagcttttttgcaaacatctttcatggtct
ccagaagtcaagcacaaaactgtcactggccttttaagaatgattgagcgggaaagatta
ggtgaagcagtggataggactcttcttaatcatcttttgaagatgttttctgctctagga
atttacatggaaagctttgagaagccatttcttgattgtacatctgagttttatgctgct
gaaggcatgaaatacatgcagcaatcagatgtgccagattatttgaagcatgtggagtca
aggttgcacgaggaacatgaaagatgtttaatatacctggatgcaagtacaagaaagcca
ttaattgcaactgcagagaagcagctccttgaacgccatatatctgccattcttgataag
gggttcacgatgctaatgaatggggaccgtatcgaggacctccggaggatgtattcactg
ttttcaagggtcaatgcccttgaatcactaaggctagcccttagctcttacatacgtgga
tctgggcagggtgttgtcatggatgaagagaaagaaaaagatatggtttcctccctctta
gaatttaaggccttgcttgacaaaatatgggatgaaagcttttccaagaatgaggcattt
tgcaacaccattaaggatgcatttgagcatcttgtcaatcttcgtcagaaccgacccgct
gagctgattgcaaagtttctagacgagaagcttcgtgctgggaacaagggtacttcggaa
gaggaattagagggtactcttgataaagttttggttctattcagatttatccagggcaag
gatgtgtttgaagcattctacaagaaggatcttgcgaaaaggctgcttttgggaaagagt
gcttctatcgatgcagagaagtccatgatctctaagctgaagaccgagtgtgggagccaa
tttacgaacaaacttgaagggatgttcaaagacattgaattatcaaaagagataaatgaa
tccttcaaacaatcatcccaggccaggacaaaactcccatctggaattgagatgagtgtg
catgttttaacaacagggtactggccaacgtatccacccatggatgtaagacttcctcac
gaattgaatgtctaccaggacattttcaaggagttctacctgagcaagtacagtgggagg
cgcttgatgtggcaaaactcattaggtcacagtgtgttaaaggctgaatttcctaaaggt
aaaaaggaactggccgtgtcactatttcagactgttgttttgatgctctttaatgatgtg
gagaagctaacttttcaagatattaaggactccactgggattgaggataaggaactgagg
aggactatgcagtcccttgcatgcggaaaagttcgagtcttgcaaaagttgcctaagggt
agagatgtggaggatgatgattcatttgtgttcaatgatggattcacggcgcctctttac
cgaataaaggtaaatgcaatccagatgaaggaaacggtagaggagaacacaagcaccact
gaaagagtatttcaggaccgtcaatatcaggttgatgccgctattgttcgaataatgaag
acaaggaaagtgctgagtcacacacttctgataactgaactcttccaacagctcaagttt
ccgataaagccggctgatttaaagaaaagaattgaaagcctcattgacagggagtacctg
gagcgtgacaagagcaacccgcagatatacaattacttggcgtaa
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