Juglans regia (English walnut): 108990325
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Entry
108990325 CDS
T05245
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
jre
Juglans regia (English walnut)
Pathway
jre04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108990325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
108990325
03009 Ribosome biogenesis [BR:
jre03009
]
108990325
04131 Membrane trafficking [BR:
jre04131
]
108990325
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
jre04147
]
108990325
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
108990325
Ribosome biogenesis [BR:
jre03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
108990325
Membrane trafficking [BR:
jre04131
]
SNARE
SNARE associated proteins
Others
108990325
Autophagy
Aggrephagy
Other aggrephagy associated proteins
108990325
Exosome [BR:
jre04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108990325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_33
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
nSTAND3
AAA_17
Mg_chelatase
AAA_28
ATPase_2
Parvo_NS1
AAA_18
IstB_IS21
ABC_tran
AAA_7
Vps4_C
NACHT
Viral_helicase1
NB-ARC
DUF815
AAA_24
TsaE
Zeta_toxin
AAA_lid_PRS2_C
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
108990325
NCBI-ProteinID:
XP_018819793
UniProt:
A0A2I4EK72
A0A833XAB1
LinkDB
All DBs
Position
9:3947485..3955623
Genome browser
AA seq
805 aa
AA seq
DB search
MANQPESSDSKSGKKDFSTAILERKKSPNRLVVDEAINDDNSVVALHPETMEKLQLFRGD
TILIKGKKRKDTICIALADDTCEVPKIRMNKVVRSNLRVRLGDVVSVHQSPDVKYGKRVH
ILPVDDTIEGVTGSLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCV
VAPDTEIFCEGEPVRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERISKNTHGYVGADLAALCT
EAALQCIREKMDVIDLEDESIDAEILNTMAVTNEHFHTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRYQI
FKSCLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRGMEN
PAAMDEDVEDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFSE
TRTGAAGSDPFATSSAGADEDDLYN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggctaaccagcccgaatcctctgactcgaaatcagggaagaaagacttctcgacggcg
attctggagcggaaaaagtcgccaaaccgtttagtcgttgacgaggcgatcaacgatgac
aactcggtagtggcgttgcacccagagaccatggagaagctccagctctttcgcggtgat
acgattctcatcaagggcaagaaacgtaaggatacaatctgcattgctcttgctgatgac
acgtgtgaggttccaaagattagaatgaacaaggttgttagatcaaatctgagggttcgg
cttggagatgtagtatctgtgcaccagtcccctgacgtgaagtatgggaaacgtgtccac
atactgccagtcgatgatactattgaaggggttactggtagtctgtttgatgcatacctg
aaaccttatttcttggaggcttatcgtcctgtgaggaagggagatttattccttgtcaga
ggaggtatgagaagtgtggagttcaaggtcattgaaactgacccaggggagtattgtgtg
gttgccccagacactgaaatcttctgtgagggggagcctgtcagaagggaggatgaggat
aggttggatgaagttggttatgatgatgtgggcggtgttcggaagcagatggctcagatt
cgtgagttagtggagctgccactaaggcatcctcagcttttcaaatcaattggtgtgaaa
ccacctaaaggaattttgctttatggacccccgggatctggaaaaacattaatcgcaagg
gctgttgctaatgagactggggcgttctttttctgtattaatgggccggagataatgtcc
aaattggctggagagagtgagagcaatctccggaaggcatttgaagaagctgagaagaat
gctccatctattattttcattgatgagcttgactctattgctcctaagagggagaagaca
catggtgaagttgaaaggcgaattgtttcacaactgttgactctcatggatggactgaaa
tctcgggctcatgttattgttattggggctaccaatcgtccaaacagcattgacccggct
ttgagaaggtttggtcggtttgatagggaaatagacattggtgttcctgatgaagttggg
cgtcttgaagttcttcgtatccataccaagaacatgaagctctctgatgatgttgacttg
gaaagaatttcaaaaaatacccatgggtatgttggtgctgatcttgcagctctctgtact
gaagccgcactgcagtgcattagagagaagatggatgtgattgacttggaagatgaatct
attgatgctgagatacttaacaccatggctgttacgaatgaacacttccacactgctctt
ggaactagcaacccatctgctttgcgtgaaactgttgttgaagtgcccaatgtcagctgg
gaggacattggaggccttgagaatgttaagcgggaacttcaagagactgttcagtatcct
gtggagcacccagagaagttcgagaaatttggaatgtcaccttcaaaaggggtacttttc
tatggtcccccaggatgtgggaaaactctcttggccaaggcaattgcaaatgaatgtcaa
gcaaacttcatcagtatcaaaggccctgaactgctgacaatgtggtttggtgagagtgaa
gccaatgttcgagaaatttttgacaaggctcgacaatctgcgccgtgtgtgcttttcttt
gatgagctcgactcgattgctactcagagaggaagcagcgttggggatgcaggtggtgct
gctgatcgagttctgaaccaactccttactgagatggatggcatgtctgcaaaaaagact
gtcttcataattggagccaccaacaggcctgacataattgatcctgcacttctgaggcca
ggtcgtctcgatcaattaatttatattcctcttcctgatgaggattcgcgctatcaaatt
tttaaatcgtgcttgagaaaatcacctgtctcaaaagatgtcgatttgagagcactggcc
aagtacactcaaggtttcagtggggctgacattacagaaatatgccagcgggcatgcaag
tatgccataagagagaacatagaaaaggatatagagagggagagaaggggaatggagaat
cctgcggctatggacgaggatgtggaggatgaggtggcagagatcaaagctgctcatttt
gaggagtccatgaagtatgcccggaggagtgttagcgatgctgatatacgcaaataccag
gcgtttgctcagaccttgcagcagtctagaggttttggaactgaattcaggttctctgag
acccgaactggggctgctgggtctgatccatttgcaacgtcttctgctggagctgatgaa
gatgatttgtataattag
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